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AT4G37250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G23300.1); Has 127505 Blast hits to 87004 proteins in 3796 species: Archae - 113; Bacteria - 9564; Metazoa - 32249; Fungi - 5071; Plants - 68196; Viruses - 226; Other Eukaryotes - 12086 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G37250-MONOMERBioGrid:15160EC:2.7.11.1eggNOG:ENOG410IEIIeggNOG:ENOG410YAQDEMBL:AK317633EMBL:AL161591
EMBL:AY065068EMBL:BT002237EMBL:CP002687EMBL:FJ708765EMBL:Z99707EnsemblPlants:AT4G37250EnsemblPlants:AT4G37250.1
entrez:829879Gene3D:3.80.10.10GeneID:829879Genevisible:C0LGS3GO:GO:0004674GO:GO:0005524GO:GO:0016021
Gramene:AT4G37250.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF35HOGENOM:HOG000116554InParanoid:C0LGS3InterPro:IPR000719InterPro:IPR001611
InterPro:IPR011009InterPro:IPR013210InterPro:IPR032675KEGG:ath:AT4G37250OMA:CAPESFRPaxDb:C0LGS3Pfam:C0LGS3
Pfam:PF00069Pfam:PF00560Pfam:PF08263Pfam:PF13516Pfscan:PS50011PhylomeDB:C0LGS3PIR:B85440
PRIDE:C0LGS3PRO:PR:C0LGS3PROSITE:PS50011ProteinModelPortal:C0LGS3Proteomes:UP000006548RefSeq:NP_195442.2SMR:C0LGS3
STRING:3702.AT4G37250.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT4G37250TMHMM:TMhelixUniGene:At.27846UniProt:C0LGS3
Coordinates (TAIR10) chr4:-:17527789..17530191
Molecular Weight (calculated) 84067.90 Da
IEP (calculated) 6.09
GRAVY (calculated) -0.22
Length 768 amino acids
Sequence (TAIR10)
(BLAST)
001: MRMELISVIF FFFCSVLSSS ALNSDGLVLM KFKSSVLVDP LSLLQTWNYK HESPCSWRGI SCNNDSKVLT LSLPNSQLLG SIPSDLGSLL TLQSLDLSNN
101: SFNGPLPVSF FNARELRFLD LSSNMISGEI PSAIGDLHNL LTLNLSDNAL AGKLPTNLAS LRNLTVVSLE NNYFSGEIPG GWRVVEFLDL SSNLINGSLP
201: PDFGGYSLQY LNVSFNQISG EIPPEIGVNF PRNVTVDLSF NNLTGPIPDS PVFLNQESNF FSGNPGLCGE PTRNPCLIPS SPSIVSEADV PTSTPAIAAI
301: PNTIGSNPVT DPNSQQTDPN PRTGLRPGVI IGIVVGDIAG IGILAVIFLY IYRCKKNKIV DNNNNDKQRT ETDTITLSTF SSSSSSPEES RRFRKWSCLR
401: KDPETTPSEE EDEDDEDEES GYNANQRSGD NKLVTVDGEK EMEIETLLKA SAYILGATGS SIMYKAVLED GRVFAVRRLG ENGLSQRRFK DFEPHIRAIG
501: KLVHPNLVRL CGFYWGTDEK LVIYDFVPNG SLVNPRYRKG GGSSSPYHLP WETRLKIAKG IARGLAYLHE KKHVHGNLKP SNILLGHDME PKIGDFGLER
601: LLTGETSYIR AGGSSRIFSS KRYTTSSREF SSIGPTPSPS PSSVGAMSPY CAPESFRSLK PSPKWDVYGF GVILLELLTG KIVSVEEIVL GNGLTVEDGH
701: RAVRMADVAI RGELDGKQEF LLDCFKLGYS CASPVPQKRP TMKESLAVLE RFHPNSSVIK SSSFHYGH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)