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AT4G37240.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.864
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVDUeggNOG:ENOG4110606EMBL:AK118312EMBL:AY085610EMBL:BT005538EMBL:CP002687EnsemblPlants:AT4G37240
EnsemblPlants:AT4G37240.1entrez:829878GeneID:829878Gramene:AT4G37240.1hmmpanther:PTHR33052hmmpanther:PTHR33052:SF17HOGENOM:HOG000238862
IntAct:Q8LE56InterPro:IPR025322KEGG:ath:AT4G37240OMA:RDNNDSAPfam:PF14009PhylomeDB:Q8LE56Proteomes:UP000006548
RefSeq:NP_568020.1STRING:3702.AT4G37240.1TAIR:AT4G37240UniGene:At.43110UniProt:Q8LE56
Coordinates (TAIR10) chr4:+:17524546..17525052
Molecular Weight (calculated) 18028.70 Da
IEP (calculated) 7.66
GRAVY (calculated) -0.15
Length 168 amino acids
Sequence (TAIR10)
(BLAST)
001: MGICSSSEST QVATAKLILQ DGRMMEFANP VKVGYVLLKY PMCFICNSDD MDFDDAVAAI SADEELQLGQ IYFALPLCWL RQPLKAEEMA ALAVKASSAL
101: MRGGGGGCRR KCVEPIVSDK LRMRVGSGDD TVGSGSGRRK VRNGDGGGSV SSSRRRKCYA AELSTIDE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)