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AT4G36870.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BEL1-like homeodomain 2
Curator
Summary (TAIR10)
Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw2 may act redundantly to repress BP in leaves.
Computational
Description (TAIR10)
BEL1-like homeodomain 2 (BLH2); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 4 (TAIR:AT2G23760.3); Has 5744 Blast hits to 5713 proteins in 356 species: Archae - 0; Bacteria - 3; Metazoa - 2532; Fungi - 390; Plants - 2517; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink).
Protein Annotations
BioGrid:15121eggNOG:ENOG410XPMQeggNOG:KOG0773EMBL:AF173816EMBL:AL161590EMBL:AY050459EMBL:CP002687
EMBL:Z99707EnsemblPlants:AT4G36870EnsemblPlants:AT4G36870.1EnsemblPlants:AT4G36870.2entrez:829840Gene3D:1.10.10.60GeneID:829840
Genevisible:Q9SW80GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009965Gramene:AT4G36870.1
Gramene:AT4G36870.2hmmpanther:PTHR11850hmmpanther:PTHR11850:SF114HOGENOM:HOG000240389InParanoid:Q9SW80IntAct:Q9SW80InterPro:IPR001356
InterPro:IPR006563InterPro:IPR008422InterPro:IPR009057iPTMnet:Q9SW80KEGG:ath:AT4G36870ncoils:CoilOMA:PVYESAG
PaxDb:Q9SW80Pfam:PF05920Pfam:PF07526Pfam:Q9SW80Pfscan:PS50071PIR:D85435PRIDE:Q9SW80
PRO:PR:Q9SW80PROSITE:PS00027PROSITE:PS50071ProteinModelPortal:Q9SW80Proteomes:UP000006548RefSeq:NP_001031797.4RefSeq:NP_195405.4
SMART:SM00389SMART:SM00574SMR:Q9SW80STRING:3702.AT4G36870.1SUPFAM:SSF46689TAIR:AT4G36870tair10-symbols:BLH2
tair10-symbols:SAW1UniGene:At.48946UniProt:Q9SW80
Coordinates (TAIR10) chr4:+:17369423..17373723
Molecular Weight (calculated) 81609.10 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.79
Length 739 amino acids
Sequence (TAIR10)
(BLAST)
001: MGITKTSPNT TILLKTFHNN SMSQDYHHHH HHNQHQGGIF NFSNGFDRSD SPNLTTQQKQ EHQRVEMDEE SSVAGGRIPV YESAGMLSEM FNFPGSSGGG
101: RDLDLGQSFR SNRQLLEEQH QNIPAMNATD SATATAAAMQ LFLMNPPPPQ QPPSPSSTTS PRSHHNSSTL HMLLPSPSTN TTHHQNYTNH MSMHQLPHQH
201: HQQISTWQSS PDHHHHHHNS QTEIGTVHVE NSGGHGGQGL SLSLSSSLEA AAKAEEYRNI YYGANSSNAS PHHQYNQFKT LLANSSQHHH QVLNQFRSSP
301: AASSSSMAAV NILRNSRYTT AAQELLEEFC SVGRGFLKKN KLGNSSNPNT CGGDGGGSSP SSAGANKEHP PLSASDRIEH QRRKVKLLTM LEEVDRRYNH
401: YCEQMQMVVN SFDIVMGHGA ALPYTALAQK AMSRHFRCLK DAVAAQLKQS CELLGDKDAA GISSSGLTKG ETPRLRLLEQ SLRQNRAFHQ MGMMEQEAWR
501: PQRGLPERSV NILRAWLFEH FLHPYPSDAD KHLLARQTGL SRNQVSNWFI NARVRLWKPM VEEMYQQESK EREREEELEE NEEDQETKNS NDDKSTKSNN
601: NESNFTAVRT TSQTPTTTAP DASDADAAVA TGHRLRSNIN AYENDASSLL LPSSYSNAAA PAAVSDDLNS RYGGSDAFSA VATCQQSVGG FDDADMDGVN
701: VIRFGTNPTG DVSLTLGLRH AGNMPDKDAS FCVREFGGF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)