AT4G36790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.764 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Major facilitator superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G18590.1); Has 13584 Blast hits to 13542 proteins in 1941 species: Archae - 325; Bacteria - 10929; Metazoa - 520; Fungi - 516; Plants - 316; Viruses - 4; Other Eukaryotes - 974 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:17336360..17338304 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52810.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.17 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.56 | ||||||||||||||||||||||||||||||||||||
| Length | 489 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGHARTRTGI ISVAFKFFRS LFPRHHRTNS MKIKTGTFLG VSISLILINL AAIMERADEN LLPSVYKEVS EAFNAGPSDL GYLTFVRNFV QGLASPLAGV 101: LVITYDRPIV LAIGTFCWAL STAAVGASSY FIQVALWRAV NGFGLAIVIP ALQSFIADSY KDGARGAGFG MLNLIGTIGG IGGGVVATVM AGSEFWGIPG 201: WRCAFIMMAA LSAVIGLLVF LFVVDPRKNI EREELMAHKM NSNSVWNDSL AAAKSVVKVS TFQIIVAQGI IGSFPWTAMV FFTMWFELIG FDHNQTAALL 301: GVFATGGAIG TLMGGIIADK MSRIYPNSGR VMCAQFSAFM GIPFSIILLK VIPQSTSSYS IFSITLFLMG LTITWCGSAV NAPMFAEVVP PRHRTMIYAF 401: DRAFEGSFSS FAAPLVGILS EKLFGYDSRG IDPLKGSSVR EADALSKGLL SMMAVPFGLC CLCYTPLHFV FQKDRENAKI ASSKETEMI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)