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AT4G36760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aminopeptidase P1
Curator
Summary (TAIR10)
Arabidopsis aminopeptidase P1
Computational
Description (TAIR10)
aminopeptidase P1 (APP1); FUNCTIONS IN: aminopeptidase activity, N-1-naphthylphthalamic acid binding; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site (InterPro:IPR001131), Peptidase M24, structural domain (InterPro:IPR000994), Creatinase (InterPro:IPR000587); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT3G05350.1); Has 10398 Blast hits to 10335 proteins in 2401 species: Archae - 277; Bacteria - 6310; Metazoa - 362; Fungi - 246; Plants - 146; Viruses - 0; Other Eukaryotes - 3057 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0006eggNOG:KOG2413EMBL:CP002687EnsemblPlants:AT4G36760
EnsemblPlants:AT4G36760.1entrez:829829Gene3D:3.40.350.10Gene3D:3.90.230.10
GeneID:829829GO:GO:0004177GO:GO:0005829GO:GO:0005886
GO:GO:0006508GO:GO:0009926GO:GO:0010013GO:GO:0046872
Gramene:AT4G36760.1hmmpanther:PTHR10804hmmpanther:PTHR10804:SF87InParanoid:F4JQH3
InterPro:IPR000587InterPro:IPR000994InterPro:IPR001131InterPro:IPR028980
InterPro:IPR029149InterPro:IPR032416iPTMnet:F4JQH3KEGG:ath:AT4G36760
KO:K01262MEROPS:M24.037OMA:ACAEMDPPaxDb:F4JQH3
Pfam:PF00557Pfam:PF01321Pfam:PF16188Pfam:PF16189
PRIDE:F4JQH3PROSITE:PS00491ProteinModelPortal:F4JQH3Proteomes:UP000006548
RefSeq:NP_195394.4scanprosite:PS00491SMR:F4JQH3STRING:3702.AT4G36760.1
SUPFAM:SSF53092SUPFAM:SSF55920TAIR:AT4G36760tair10-symbols:APP1
tair10-symbols:ATAPP1UniGene:At.4630UniProt:F4JQH3
Coordinates (TAIR10) chr4:+:17326688..17329979
Molecular Weight (calculated) 71996.80 Da
IEP (calculated) 4.96
GRAVY (calculated) -0.32
Length 645 amino acids
Sequence (TAIR10)
(BLAST)
001: MSEILSSLRS LMASHSPPLD ALVVPSEDYH QSEYVSARDK RREFVSGFSG SAGLALITKK EARLWTDGRY FLQALQQLSD EWTLMRMGED PLVEVWMSDN
101: LPEEANIGVD SWCVSVDTAN RWGKSFAKKN QKLITTTTDL VDEVWKSRPP SEMSPVVVHP LEFAGRSVSH KFEDLRAKLK QEGARGLVIA ALDEVAWLYN
201: IRGTDVAYCP VVHAFAILTT DSAFLYVDKK KVSDEANSYF NGLGVEVREY TDVISDVALL ASDRLISSFA SKTVQHEAAK DMEIDSDQPD RLWVDPASCC
301: YALYSKLDAE KVLLQPSPIS LSKALKNPVE LEGIKNAHVR DGAAVVQYLV WLDNQMQELY GASGYFLEAE ASKKKPSETS KLTEVTVSDK LESLRASKEH
401: FRGLSFPTIS SVGSNAAVIH YSPEPEACAE MDPDKIYLCD SGAQYLDGTT DITRTVHFGK PSAHEKECYT AVFKGHVALG NARFPKGTNG YTLDILARAP
501: LWKYGLDYRH GTGHGVGSYL CVHEGPHQVS FRPSARNVPL QATMTVTDEP GYYEDGNFGI RLENVLVVND AETEFNFGDK GYLQFEHITW APYQVKLIDL
601: DELTREEIDW LNTYHSKCKD ILAPFMNQTE MEWLKKATEP VSVSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)