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AT4G36660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.989
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1195)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF1195); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1195 (InterPro:IPR010608); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1195) (TAIR:AT5G65650.1); Has 67 Blast hits to 67 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXRSeggNOG:ENOG4111D8WEMBL:BT012127EMBL:BT012201
EMBL:CP002687EnsemblPlants:AT4G36660EnsemblPlants:AT4G36660.1entrez:829819
GeneID:829819GO:GO:0005794GO:GO:0016021Gramene:AT4G36660.1
hmmpanther:PTHR34358hmmpanther:PTHR34358:SF2HOGENOM:HOG000240138InterPro:IPR010608
KEGG:ath:AT4G36660OMA:IAKMSARPfam:PF06708PhylomeDB:Q6NLX7
Proteomes:UP000006548RefSeq:NP_195384.5TAIR:AT4G36660TMHMM:TMhelix
UniGene:At.31307UniGene:At.48945UniGene:At.67948UniProt:Q6NLX7
Coordinates (TAIR10) chr4:-:17285953..17287281
Molecular Weight (calculated) 19992.90 Da
IEP (calculated) 9.43
GRAVY (calculated) -0.33
Length 179 amino acids
Sequence (TAIR10)
(BLAST)
001: MKEDDALPTT TTTGTATGTA MANSKKESSD SVLFGRGRYK FWAFAAILLL AFWSMFTGTV TLRLSTGNLN RLSEDLGIPN YDNLDVLEME EREKVVKHMW
101: DVYTNSRRIK LPRFWQEAFV AAYEELTSDV PGVREAAIGE IAKMSARSIT LDPPPSRSMS ARDLGRNLKR ILHKPAASS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)