AT4G36610.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.800 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G18360.1); Has 7159 Blast hits to 7154 proteins in 1280 species: Archae - 79; Bacteria - 4806; Metazoa - 419; Fungi - 48; Plants - 467; Viruses - 0; Other Eukaryotes - 1340 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:17265545..17267274 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35623.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.84 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||
| Length | 317 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVNFVEVQKP LLYGLMKMAG VVPYTLEIEP GTKINFWVPK ETLKKNSGTG KPTKPDKPKK PVVLLIHGFA GEGIVTWQFQ VGALSKKYSV YIPDLLFFGG 101: SYTDNSDRSP AFQADCLVKG LRILGVDKFV PVGFSYGGMV AFKIAEAYPD MVRAIVVSGS IPTMTDTINE ASLNRLGFSS STDLLLPTSV TGLKALFTIA 201: VHKPLWFPKR LFKDYIEVMF NNRKERAELL EAVVVSNKEA QIPHFPRKIH FLWGESDQIF DLELARDMKE QIGENATIES IKKAGHLVQL ERPCVYNRRL 301: KKFLASIHSE DKIKMLH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)