AT4G36580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : AAA-type ATPase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
AAA-type ATPase family protein; FUNCTIONS IN: ATPase activity, zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G18330.1); Has 33237 Blast hits to 29448 proteins in 3004 species: Archae - 1414; Bacteria - 11083; Metazoa - 6547; Fungi - 3972; Plants - 2549; Viruses - 53; Other Eukaryotes - 7619 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:17257958..17260661 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 71011.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.80 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.64 | ||||||||||||||||||||||||||||||||||||||||
| Length | 632 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS SRFRFPFFSS SPSPPPSDSP ANQSSSKSKA EPDEPKGSGF DPEALERAAK ALRDINSSPH SKQVFDLMRK 101: QEKTRLAELT AETSHYEAIQ AHNDIGRQQK LAEDQRNLLQ TQAQTKAQNL RYEDELARKR QQTDHEAQRH HNVELVKMQE ASSIRKEKAK IATEEQIQAQ 201: HRQTEKERAE LERETIRVKA MAEAEGRAHE AKLTEEQNRR LLMERINGER EKWLAAINTM FSHIEGGFRT LLTDRNKLIM TVGGATALAA GVYTTREGAR 301: VTWGYINRML GQPSLIRESS MRRFPWTGSV SQFKNRISGA AAASAAEGKK PLDNVILHTS LKKRIERLAR ATANTKSHQA PFRNMMFYGP PGTGKTMVAR 401: EIARKSGLDY AMMTGGDVAP LGSQAVTKIH QIFDWAKKSN KGLLLFIDEA DAFLCERNST YMSEAQRSAL NALLFRTGDQ SRDIVLVLAT NRRGDLDSAV 501: TDRIDEVIEF PLPGEEERFK LLNLYLNKYL KMGDNNEDTK PKWSHLFKKL SQKITVEEDL TDKVISEAAK KTEGFSGREI AKLVAGVQAG VYGRADCVLD 601: SQLFKEIVEY KVEEHHRRHM LASEGFQPLL FS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)