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AT4G36360.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : beta-galactosidase 3
Curator
Summary (TAIR10)
putative beta-galactosidase (BGAL3 gene)
Computational
Description (TAIR10)
beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Galactose-binding domain-like (InterPro:IPR008979), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G36360-MONOMERBioCyc:ARA:GQT-587-MONOMERCAZy:GH35EC:3.2.1.23eggNOG:COG1874eggNOG:KOG0496EMBL:AJ270299
EMBL:AK230040EMBL:AL022141EMBL:AL161589EMBL:AY056285EMBL:AY091432EMBL:CP002687EMBL:Z37275
EMBL:Z99708EnsemblPlants:AT4G36360EnsemblPlants:AT4G36360.1entrez:829788ExpressionAtlas:Q9SCV9Gene3D:2.60.120.260Gene3D:3.20.20.80
GeneID:829788Genevisible:Q9SCV9GO:GO:0004565GO:GO:0005618GO:GO:0005975GO:GO:0030246GO:GO:0048046
hmmpanther:PTHR23421hmmpanther:PTHR23421:SF79HOGENOM:HOG000239919InParanoid:Q9SCV9IntAct:Q9SCV9InterPro:IPR000922InterPro:IPR001944
InterPro:IPR008979InterPro:IPR013781InterPro:IPR017853InterPro:IPR019801InterPro:IPR031330KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23
KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23KEGG:ath:AT4G36360OMA:QTSQMEMPANTHER:PTHR23421PaxDb:Q9SCV9
Pfam:PF01301Pfam:PF02140Pfam:Q9SCV9Pfscan:PS50228PhylomeDB:Q9SCV9PIR:B85429PIR:T04600
PRIDE:Q9SCV9PRINTS:PR00742PRO:PR:Q9SCV9PROSITE:PS01182PROSITE:PS50228ProteinModelPortal:Q9SCV9Proteomes:UP000006548
RefSeq:NP_568001.1RefSeq:NP_849506.1scanprosite:PS01182SMR:Q9SCV9STRING:3702.AT4G36360.1SUPFAM:SSF49785SUPFAM:SSF51445
TAIR:AT4G36360tair10-symbols:BGAL3TMHMM:TMhelixUniGene:At.703UniProt:Q9SCV9
Coordinates (TAIR10) chr4:-:17176840..17181143
Molecular Weight (calculated) 95198.00 Da
IEP (calculated) 7.23
GRAVY (calculated) -0.29
Length 856 amino acids
Sequence (TAIR10)
(BLAST)
001: MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)