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AT4G36230.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 250444 Blast hits to 52918 proteins in 2611 species: Archae - 614; Bacteria - 68464; Metazoa - 90603; Fungi - 16312; Plants - 24752; Viruses - 3701; Other Eukaryotes - 45998 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JU0CeggNOG:ENOG41107C0EMBL:AL022141EMBL:AL161589EMBL:CP002687EnsemblPlants:AT4G36230EnsemblPlants:AT4G36230.1
entrez:3770585GeneID:3770585GO:GO:0016021GO:GO:0048046Gramene:AT4G36230.1KEGG:ath:AT4G36230OMA:GRCWYPG
PIR:T04592Proteomes:UP000006548RefSeq:NP_195346.1STRING:3702.AT4G36230.1TAIR:AT4G36230TMHMM:TMhelixUniGene:At.74495
UniProt:O65514
Coordinates (TAIR10) chr4:+:17145586..17146251
Molecular Weight (calculated) 20344.80 Da
IEP (calculated) 7.29
GRAVY (calculated) -0.67
Length 221 amino acids
Sequence (TAIR10)
(BLAST)
001: MESVRESSLS SLMLFLFGLA YVVFLLNSNC VNGLRDLKER DASESNFVNA TSSSVLDSKS TANISTVEFE NALDDQNVNK TEKCESRAGG GGGGGGGGGG
101: GGGGQGSGGG GGEGNGGNGK DNSHKRNKSS GGGGGGGGGG GGGSGNGSGR GRGGGGGGGG GGGGGGGGGG GGGGGGGGGG GSDGKGGGWG FGFGWGGDGP
201: GGNFGRCWYP GCTKKSTESH N
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)