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AT4G36210.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.929
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF726)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF726); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 675 Blast hits to 638 proteins in 219 species: Archae - 12; Bacteria - 101; Metazoa - 133; Fungi - 230; Plants - 68; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410YB1ZeggNOG:KOG2385EMBL:CP002687EnsemblPlants:AT4G36210EnsemblPlants:AT4G36210.1entrez:829778ExpressionAtlas:F4JPN3
Gene3D:3.40.50.1820GeneID:829778GO:GO:0016021Gramene:AT4G36210.1hmmpanther:PTHR17920hmmpanther:PTHR17920:SF7InterPro:IPR007941
InterPro:IPR029058ncoils:CoilPANTHER:PTHR17920PaxDb:F4JPN3Pfam:PF05277PhylomeDB:F4JPN3PRIDE:F4JPN3
ProteinModelPortal:F4JPN3Proteomes:UP000006548RefSeq:NP_849505.2STRING:3702.AT4G36210.3SUPFAM:SSF53474TAIR:AT4G36210TMHMM:TMhelix
UniGene:At.23644UniProt:F4JPN3
Coordinates (TAIR10) chr4:+:17130951..17134302
Molecular Weight (calculated) 59769.10 Da
IEP (calculated) 5.57
GRAVY (calculated) 0.02
Length 550 amino acids
Sequence (TAIR10)
(BLAST)
001: MVEQEMALAK AADAMVHSIQ CSVSIDAKKE KHQEYENECR EKYAVPEVKS KDVDLDKEKD KKEAAESAAR EGLEAGVVII DGSHKPEVLE NEKSVEEVTL
101: LSHQRKINVL YELLSACLSD KHHEDKKCKR CRKGYDARHR VALRLLATWF NIEWIKVEAI ETMVACSAMA IQKSAEMKGE DNLTPTTSWA KWKRGGIIGA
201: AAITGGTLMA ITGGLAAPAI AAGFGALAPT LGTIIPVIGA GGFAAAASAA GTVAGSVAVA ASFGAAGAGL TGTKMARRIG DLDEFEFKAI GENHNQGRLA
301: VEVLVAGVVF EEEDFVKPWE GLTSNLERYT LQWESKNLIL VSTAIQDWLT SRLAMELMKQ GAMHTVLASL LMALAWPATI LVAADFIDSK WSIAIDRSDK
401: AGRLLAEVLQ KGLQGNRPIT LVGFSLGARV IFKCLQALAE TEQNAELVER VVLLGAPISI NSENWRDVRK MVAGRFINVY ATNDWTLGIA FRASLISQGL
501: AGIQPICIPG IENVDVTDMV EGHSSYLWKT QQILERLEID TYYPVFRDTL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)