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AT4G36110.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.798
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

Arabidopsis cell culture (plastidal marker)

At4g36110-GFP
(full-length)
plastidal marker-RFPoverlay

Images by Sandra Tanz
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : SAUR-like auxin-responsive protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G18010.1); Has 1361 Blast hits to 1344 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1360; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IYW1eggNOG:ENOG410Z28UEMBL:AF324666EMBL:AF327530EMBL:AF349524EMBL:AL022373EMBL:AL161588
EMBL:AY065057EMBL:AY093746EMBL:CP002687EnsemblPlants:AT4G36110EnsemblPlants:AT4G36110.1entrez:829768GeneID:829768
GO:GO:0009733Gramene:AT4G36110.1hmmpanther:PTHR31374hmmpanther:PTHR31374:SF41HOGENOM:HOG000238628IntAct:O65648InterPro:IPR003676
KEGG:ath:AT4G36110KO:K14488OMA:CYFNDVPPfam:PF02519PhylomeDB:O65648PIR:T05504Proteomes:UP000006548
RefSeq:NP_195334.1STRING:3702.AT4G36110.1TAIR:AT4G36110UniGene:At.2229UniGene:At.68954UniProt:O65648
Coordinates (TAIR10) chr4:+:17090031..17090345
Molecular Weight (calculated) 11914.40 Da
IEP (calculated) 8.87
GRAVY (calculated) -0.27
Length 104 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIKKSNKAA LSQAASLKQI LKRCSSLGKK NQGNCYFNDV PKGHFPVYVG QHRSRYVVPI SWLDHHEFQS LLQLAEEEFG FEHEMGLTIP CDEVVFRSLI
101: SMFR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)