AT4G35940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17787.1); Has 45288 Blast hits to 24095 proteins in 1140 species: Archae - 93; Bacteria - 2895; Metazoa - 13424; Fungi - 2873; Plants - 1183; Viruses - 123; Other Eukaryotes - 24697 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:17021672..17023593 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 52724.20 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.28 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.54 | ||||||||||||||||||||||||
| Length | 451 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSRCFPFPPP GYVLNGIRDE AVIVSSIKGV EEKAKKEQRR KDRRSDKKDK KDKKERKEKK EKKEKKRKER EGKEVGSEKR SHKRRRKEDG AKVDLFHKLK 101: ESEVNCLEKS SLTVERELLQ STSQNSCDST LNSNEMLPKQ KEVQQPLDGR HNNNNNEKRV EKQQPLDGRH NNNNEKRVEK QQPLDGRHNN NNEKRIEKQQ 201: PLNGRHNNNN EKLMEKQQPL NGRHNNNNEK RIEKQQPLNG RHNNKEKQKE KQQPLDVRHN NNDSESIIRI RLPIRRQKDP EVMMTNKDQE KPGPSRGIKL 301: DSSQLPTREP VNQHPCSTSA AEHASKPREE KRKDPIFRGK HGKEKISSSS TRETYQPPKS LCNCPPSMVL QFLDVVENWV PNTIERRVDL INSEDEECWW 401: SMKKPPSSTT EICKQLNREN EIKQVGNTMG WPCARLLPEA DVYALPYTVP F |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)