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AT4G35660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Arabidopsis protein of unknown function (DUF241)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JE9QeggNOG:ENOG411176UEMBL:AL031135EMBL:AL161587
EMBL:AY924830EMBL:CP002687EMBL:DQ132716EnsemblPlants:AT4G35660
EnsemblPlants:AT4G35660.1entrez:829718GeneID:829718Gramene:AT4G35660.1
hmmpanther:PTHR33070hmmpanther:PTHR33070:SF3HOGENOM:HOG000242965InterPro:IPR004320
KEGG:ath:AT4G35660OMA:VDNSMIRPfam:PF03087PhylomeDB:O81797
PIR:T04671Proteomes:UP000006548RefSeq:NP_195291.1STRING:3702.AT4G35660.1
TAIR:AT4G35660UniGene:At.54616UniProt:O81797
Coordinates (TAIR10) chr4:+:16912792..16913658
Molecular Weight (calculated) 32183.90 Da
IEP (calculated) 10.64
GRAVY (calculated) -0.28
Length 288 amino acids
Sequence (TAIR10)
(BLAST)
001: MAESSSSSVA TTHVPARSIS LPTRLIHPKA QRVEEELKKI QALNSSSSAS SRIQLGLAKL VELYDFVNEQ VISSPQGQQA LRLCRNRKLV EDALDESIVL
101: LDVSDFTRDL IGTLMEHIQE LQSALRRRRG NLSSVQSEIR SYISFHKKSK TEAARQVKSL ARRQTKKKAW VIKQSGGLDE HSSMVSNILR QSNASTISIL
201: QSLLQFLSTS GENNEKKNGE IGCVDNSMIR SFFGRIIGRK MVKEIDAQTI LGRLAMVNVS LEAIKDELSY LSRRLIQHRA SLLNIVTL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)