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AT4G35490.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : mitochondrial ribosomal protein L11
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
mitochondrial ribosomal protein L11 (MRPL11); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic large ribosomal subunit, ribosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L11, C-terminal domain (InterPro:IPR020783), Ribosomal protein L11, bacterial-type (InterPro:IPR006519), Ribosomal protein L11, N-terminal domain (InterPro:IPR020784), Ribosomal protein L11 (InterPro:IPR000911); BEST Arabidopsis thaliana protein match is: plastid ribosomal protein l11 (TAIR:AT1G32990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0080eggNOG:KOG3257EMBL:AK226300EMBL:AL117188EMBL:AL161587EMBL:AY088804EMBL:BT025614
EMBL:CP002687EnsemblPlants:AT4G35490EnsemblPlants:AT4G35490.1entrez:829701Gene3D:1.10.10.250Gene3D:3.30.1550.10GeneID:829701
GO:GO:0000027GO:GO:0003735GO:GO:0005840GO:GO:0006412GO:GO:0019843Gramene:AT4G35490.1HAMAP:MF_00736
hmmpanther:PTHR11661hmmpanther:PTHR11661:SF1HOGENOM:HOG000082123InterPro:IPR000911InterPro:IPR006519InterPro:IPR020783InterPro:IPR020784
KEGG:ath:AT4G35490KO:K02867OMA:TYDLKIGPANTHER:PTHR11661Pfam:PF00298Pfam:PF03946PhylomeDB:Q9SVW7
PIR:T41746Proteomes:UP000006548RefSeq:NP_195274.1SMART:SM00649SMR:Q9SVW7STRING:3702.AT4G35490.1SUPFAM:SSF46906
SUPFAM:SSF54747TAIR:AT4G35490tair10-symbols:MRPL11TIGRfam:TIGR01632TIGRFAMs:TIGR01632UniGene:At.43896UniProt:Q9SVW7
Coordinates (TAIR10) chr4:+:16855918..16856385
Molecular Weight (calculated) 16888.70 Da
IEP (calculated) 10.28
GRAVY (calculated) -0.09
Length 155 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAAAKEILR RPVAATIRLT VPAGGARPAP PVGPALGQYR LNLMAFCKDF NARTQKYKPD TPMAVTITAF KDNSFEFTVK SPTVSWYIKK AAGVDKGSTR
101: PGHLSVTTLS VRHVYEIAKV KQTDPFCQYM PLESICKSII GTANSMGIKI VQDLE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)