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AT4G35290.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutamate receptor 2
Curator
Summary (TAIR10)
Encodes a putative glutamate receptor like-protein, member of Putative ligand-gated ion channel subunit family
Computational
Description (TAIR10)
glutamate receptor 2 (GLUR2); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus, cellular sodium ion homeostasis, cellular potassium ion homeostasis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: inflorescence meristem, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2 (TAIR:AT2G17260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:14964eggNOG:ENOG410ISR3eggNOG:ENOG410XPSHEMBL:AF159498EMBL:AF159499EMBL:AL022604EMBL:AL161587
EMBL:AY059778EMBL:CP002687EnsemblPlants:AT4G35290EnsemblPlants:AT4G35290.1EnsemblPlants:AT4G35290.2entrez:829682GeneID:829682
Genevisible:Q93YT1GO:GO:0004970GO:GO:0005262GO:GO:0005622GO:GO:0005886GO:GO:0006816GO:GO:0008066
GO:GO:0016021GO:GO:0019722GO:GO:0070588GO:GO:0071230Gramene:AT4G35290.1Gramene:AT4G35290.2hmmpanther:PTHR18966
hmmpanther:PTHR18966:SF222HOGENOM:HOG000239558InParanoid:Q93YT1InterPro:IPR001320InterPro:IPR001638InterPro:IPR001828InterPro:IPR017103
InterPro:IPR028082KEGG:ath:AT4G35290OMA:PREIINEPaxDb:Q93YT1Pfam:PF00060Pfam:PF00497Pfam:PF01094
Pfam:Q93YT1PhylomeDB:Q93YT1PIR:T06128PIRSF:PIRSF037090PRIDE:Q93YT1PRO:PR:Q93YT1ProteinModelPortal:Q93YT1
Proteomes:UP000006548RefSeq:NP_567981.1RefSeq:NP_974686.1SMART:SM00079SMR:Q93YT1STRING:3702.AT4G35290.1SUPFAM:SSF53822
SUPFAM:SSF53850TAIR:AT4G35290tair10-symbols:ATGLR3.2tair10-symbols:ATGLUR2tair10-symbols:GLR3.2tair10-symbols:GLUR2TMHMM:TMhelix
UniGene:At.2283UniProt:Q93YT1
Coordinates (TAIR10) chr4:+:16790290..16793461
Molecular Weight (calculated) 101668.00 Da
IEP (calculated) 8.16
GRAVY (calculated) 0.03
Length 912 amino acids
Sequence (TAIR10)
(BLAST)
001: MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG
101: PQTSIMAHVL SHLANELSVP MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT ALGDELEGRR CKISYKAVLP
201: LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR
301: WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD
401: IINVVDDGFR QIGYWSNHSG LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE FVSRLDGSNK VQGYAIDVFE
501: AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI
601: VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV
701: GSYAENYMID ELNIARSRLV PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA IDMSTAILGL SETGQLQKIH
801: DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR
901: NDDLSLKPSR PI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)