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AT4G34700.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : LYR family of Fe/S cluster biogenesis protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
LYR family of Fe/S cluster biogenesis protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrial membrane, plasma membrane, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:14904eggNOG:ENOG4111PESeggNOG:KOG3466EMBL:AF412069EMBL:AK221137EMBL:AL023094EMBL:AL161586
EMBL:AY085825EMBL:BT001011EMBL:CP002687EnsemblPlants:AT4G34700EnsemblPlants:AT4G34700.1entrez:829622GeneID:829622
Genevisible:Q945M1GO:GO:0005739GO:GO:0005747GO:GO:0005774GO:GO:0005975GO:GO:0006120GO:GO:0008137
GO:GO:0009853GO:GO:0031966GO:GO:0045271Gramene:AT4G34700.1hmmpanther:PTHR12868hmmpanther:PTHR12868:SF0HOGENOM:HOG000193319
InParanoid:Q945M1IntAct:Q945M1InterPro:IPR008011InterPro:IPR033034KEGG:ath:AT4G34700KO:K03965OMA:RHLWRGQ
PANTHER:PTHR12868:SF0PaxDb:Q945M1Pfam:PF05347Pfam:Q945M1PhylomeDB:Q945M1PIR:T05290PRIDE:Q945M1
PRO:PR:Q945M1Proteomes:UP000006548RefSeq:NP_567970.1STRING:3702.AT4G34700.1SwissPalm:Q945M1TAIR:AT4G34700tair10-symbols:AtCIB22
tair10-symbols:CIB22TCDB:3.D.1.6.3UniGene:At.23017UniProt:Q945M1
Coordinates (TAIR10) chr4:+:16556874..16558362
Molecular Weight (calculated) 13617.00 Da
IEP (calculated) 8.97
GRAVY (calculated) -0.73
Length 117 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGVSTAAYF ARRAAQKERV RILYRRALKD TLNWAVHRHI FYRDASDLRE KFNVNQDVED VDRIDKLIAH GEAEYNKWRH PDPYIVPWAP GGSKFCRNPT
101: PPAGIEIVYN YGLEDNP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)