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AT4G34390.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : extra-large GTP-binding protein 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
extra-large GTP-binding protein 2 (XLG2); FUNCTIONS IN: guanyl nucleotide binding, signal transducer activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1); Has 3202 Blast hits to 3201 proteins in 381 species: Archae - 0; Bacteria - 2; Metazoa - 2082; Fungi - 561; Plants - 350; Viruses - 0; Other Eukaryotes - 207 (source: NCBI BLink).
Protein Annotations
BioGrid:14871eggNOG:ENOG410XNVQeggNOG:KOG0082EMBL:AL035521EMBL:AL161585EMBL:CP002687EMBL:GQ229389
EnsemblPlants:AT4G34390EnsemblPlants:AT4G34390.1entrez:829589Gene3D:1.10.400.10Gene3D:3.40.50.300GeneID:829589Genevisible:C6KIE6
GO:GO:0003924GO:GO:0004871GO:GO:0005525GO:GO:0005634GO:GO:0007186GO:GO:0009617GO:GO:0042742
GO:GO:0046872Gramene:AT4G34390.1hmmpanther:PTHR10218hmmpanther:PTHR10218:SF226HOGENOM:HOG000241648InParanoid:C6KIE6IntAct:C6KIE6
InterPro:IPR001019InterPro:IPR011025InterPro:IPR027417iPTMnet:C6KIE6KEGG:ath:AT4G34390OMA:MFQEMSTPANTHER:PTHR10218
PaxDb:C6KIE6Pfam:C6KIE6Pfam:PF00503PhylomeDB:C6KIE6PIR:T04785PRIDE:C6KIE6PRO:PR:C6KIE6
ProteinModelPortal:C6KIE6Proteomes:UP000006548Reactome:R-ATH-399997Reactome:R-ATH-416476Reactome:R-ATH-416482Reactome:R-ATH-418555Reactome:R-ATH-434316
RefSeq:NP_195165.2SMART:SM00275SMR:C6KIE6STRING:3702.AT4G34390.1SUPFAM:SSF47895SUPFAM:SSF52540TAIR:AT4G34390
tair10-symbols:XLG2UniGene:At.27827UniProt:C6KIE6
Coordinates (TAIR10) chr4:+:16441579..16444840
Molecular Weight (calculated) 97188.00 Da
IEP (calculated) 5.78
GRAVY (calculated) -0.53
Length 861 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAVIRKLLP FPSPNPKRDN RESDDDDETS SGYRIEYSFA SEYKGPLIAN VPRALPVEVD QIPTALPVSF SSLRSGISYP VAPLVMTKDT KRPPDSGIEK
101: KNGFVDSAAG SSVVLIGRDV VSGSSSSSSS KRLDVPEEVK SPADFRLSPS SPLSASAREE DHLDDDRVSD VGPRAVRFVE PFQSSECDES SYVSDGESIA
201: ATHRAERKGK RGSCYRCQLG NRFTEKEVCI VCDAKYCFNC VRRAMGAMPE GRKCQACIGY RIDESKRASL GKCSRMLKRH LTDSELRQVM NAEITCKANQ
301: LPSRLIIVND KPLSEDELYT LQTCPNPPKK LKPGHYWYDK VAGYWGKIGE KPSQIISPNN SIGGYISEKV SNGDTEIYIN GREITKPELT MLKWAGVQCE
401: GKPHFWVDSD GSYREEGQKH PIGNIWSKKR AKIACAVFSL PVPPASSAVE PYDVPLYEQK MLNKLLLIGS EKGGATTIYK QARSLYNVSF SLEDRERIKF
501: IIQTNLYTYL AMVLEAHERF EKEMSNDQSS GNVGDETSAK PGNSINPRLK HFSDWVLKEK EDGNLKIFPP SSRENAQTVA DLWRVPAIQA TYKRLRDTLP
601: RNAVYFLERI LEISRSEYDP SDMDILQAEG LSSMEGLSCV DFSFPSTSQE ESLESDYQHD TDMKYQLIRL NPRSLGENWK LLEMFEDADL VIFCVSLTDY
701: AENIEDGEGN IVNKMLATKQ LFENMVTHPS LANKRFLLVL TKFDLLEEKI EEVPLRTCEW FEDFNPLISQ NQTSRHNPPM AQRAFHYIGY KFKRLYDSIL
801: EPVNMRGRSF KPKLFVCQVS LESDTVDNAL RYAREILKWH VEETSMFQEM STTSIEASSS S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)