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AT4G34330.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.782
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF677)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF677); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT4G34320.1); Has 165 Blast hits to 164 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:829583EMBL:AL035521EMBL:AL161585EMBL:CP002687
EnsemblPlants:AT4G34330EnsemblPlants:AT4G34330.1entrez:829583GeneID:829583
Genevisible:Q9SYZ8GO:GO:0016021Gramene:AT4G34330.1hmmpanther:PTHR31113
hmmpanther:PTHR31113:SF3HOGENOM:HOG000029756InParanoid:Q9SYZ8InterPro:IPR007749
KEGG:ath:AT4G34330ncoils:CoilOMA:ACKEDMEPaxDb:Q9SYZ8
Pfam:PF05055Pfam:Q9SYZ8PhylomeDB:Q9SYZ8PIR:T04779
PRIDE:Q9SYZ8PRO:PR:Q9SYZ8Proteomes:UP000006548RefSeq:NP_195159.1
TAIR:AT4G34330TMHMM:TMhelixUniGene:At.54600UniProt:Q9SYZ8
Coordinates (TAIR10) chr4:+:16424713..16425890
Molecular Weight (calculated) 40459.10 Da
IEP (calculated) 9.81
GRAVY (calculated) -0.32
Length 354 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNKTSRKSK EKSGRNYTTE LRSYEAACKE DMEIQSFDTR MQARTSHVIS TLATGVEVRS LSFDSLKAVI GSLLDMNQEV AKVILDCKKD IWKNQEMFEF
101: VEAYFETSLK TLDFFNALKR GLQGVQINHL FILDGNGYKK TLQELKRFKD ADRPFDQDFF KMFQSVYNQQ KWMLDKLQRR QNKLDKKLKR IRTWRKLSSI
201: IFMATFATLV ICSVLAATMA APHVAAALAA ATPPVGSMGK WIDSLWKNYE NEIKGQTEVF SSMYVGTYVA VQDLNNIKDL IKRLDTEIRG MVKNAEYAGE
301: LGPVKIGINA IKTQLEVFKK NVEELEIQAD MCSTDIRRAR TVILQRIINA TCST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)