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AT4G34260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22080600 (2011): extracellular region
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 1,2-alpha-L-fucosidases
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUC95A; FUNCTIONS IN: 1,2-alpha-L-fucosidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase-like (InterPro:IPR008928), Uncharacterised conserved protein UCP007663 (InterPro:IPR016518); Has 1349 Blast hits to 1316 proteins in 300 species: Archae - 2; Bacteria - 1123; Metazoa - 0; Fungi - 116; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G34260-MONOMERCAZy:GH95EC:3.2.1.51eggNOG:ENOG410IHPJ
eggNOG:ENOG410XPGVEMBL:AL035521EMBL:AL161585EMBL:AY125494
EMBL:BT002722EMBL:CP002687EnsemblPlants:AT4G34260EnsemblPlants:AT4G34260.1
entrez:829575Gene3D:2.70.98.50GeneID:829575Genevisible:Q8L7W8
GO:GO:0047513GO:GO:0048046Gramene:AT4G34260.1hmmpanther:PTHR31084
hmmpanther:PTHR31084:SF0HOGENOM:HOG000161832InParanoid:Q8L7W8InterPro:IPR008928
InterPro:IPR016518InterPro:IPR027414KEGG:ath:AT4G34260KO:K15923
OMA:DAGDPMWPaxDb:Q8L7W8Pfam:PF14498Pfam:Q8L7W8
PhylomeDB:Q8L7W8PIR:T04772PIRSF:PIRSF007663PRIDE:Q8L7W8
PRO:PR:Q8L7W8ProteinModelPortal:Q8L7W8Proteomes:UP000006548RefSeq:NP_195152.2
SMR:Q8L7W8STRING:3702.AT4G34260.1SUPFAM:SSF48208TAIR:AT4G34260
tair10-symbols:FUC95ATMHMM:TMhelixUniGene:At.45833UniProt:Q8L7W8
Coordinates (TAIR10) chr4:+:16398130..16401591
Molecular Weight (calculated) 93730.30 Da
IEP (calculated) 7.25
GRAVY (calculated) -0.29
Length 843 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEKSSFFVH FSCLLLLLTI IITCGEGVRN PVRPRSSERR ALMDGQDLSR PLKLTFGGPS RNWTDAIPIG NGRLGATIWG GVSSEILNIN EDTIWTGVPA
101: DYTNQKAPEA LAEVRRLVDE RNYAEATSEA VKLSGQPSDV YQIVGDLNLE FDSSHRKYTQ ASYRRELDLE TAVAKVSYSV GAVDFSREFF ASNPDQVIIA
201: KIYASKPGSL SFKVSFDSEL HHHSETNPKA NQILMRGSCR PKRLPVNLKK SINATNIPYD DHKGLQFASI LEVRVSNGGS VSSLGGKKLS VEKADWAVLL
301: LAASSNFDGP FTMPVDSKID PAKECVNRIS SVQKYSYSDL YARHLGDYQK LFNRVSLHLS GSSTNETVQQ ATSTAERVRS FKTDQDPSLV ELLFQYGRYL
401: LISSSRPGTQ VANLQGIWNR DIQPPWDGAP HLNINLQMNY WHSLPGNIRE CQEPLFDYMS ALAINGRKTA QVNYGASGWV AHQVSDIWAK TSPDRGEAVW
501: ALWPMGGAWL CTHAWEHYTY TMDKEFLKKK GYPLLEGCTS FLLDWLIKGK DGFLQTNPST SPEHMFTAPI GKPASVSYSS TMDIAIIKEV FADIVSASEI
601: LGKTNDTLIG KVIAAQAKLP PTRISKDGSI REWAEDFEDP EVHHRHVSHL FGLFPGHTIT VEKSPELAKA VEATLKKRGE EGPGWSTTWK AALWARLHNS
701: EHAYRMVTHI FDLVDPLNER NYEGGLYSNM FTAHPPFQID ANFGFAAAVA EMLVQSTTKD LYLLPALPAD KWPNGIVNGL RARGGVTVSI KWMEGNLVEF
801: GLWSEQIVST RIVYRGISAA AELLPGKVFT FDKDLRCIRT DKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)