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AT4G34215.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Domain of unknown function (DUF303)
Curator
Summary (TAIR10)
Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.
Computational
Description (TAIR10)
Domain of unknown function (DUF303) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF303) (TAIR:AT3G53010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
DNASU:829570EC:3.1.-.-eggNOG:ENOG410IJPQeggNOG:ENOG4111I8EEMBL:AL021961EMBL:AL161585EMBL:AY088389
EMBL:CP002687EnsemblPlants:AT4G34215EnsemblPlants:AT4G34215.1EnsemblPlants:AT4G34215.2entrez:829570EvolutionaryTrace:Q8L9J9GeneID:829570
Genevisible:Q8L9J9GO:GO:0016787Gramene:AT4G34215.1Gramene:AT4G34215.2HOGENOM:HOG000240574InterPro:IPR005181InterPro:IPR013830
KEGG:ath:AT4G34215OMA:IDTGKVCPaxDb:Q8L9J9PDB:2APJPDBsum:2APJPfam:PF03629Pfam:Q8L9J9
PhylomeDB:Q8L9J9PIR:T05414PRIDE:Q8L9J9PRO:PR:Q8L9J9ProteinModelPortal:Q8L9J9Proteomes:UP000006548RefSeq:NP_567960.1
RefSeq:NP_849493.1SMR:Q8L9J9SUPFAM:SSF52266TAIR:AT4G34215UniGene:At.27025UniProt:Q8L9J9
Coordinates (TAIR10) chr4:-:16380203..16381192
Molecular Weight (calculated) 28359.90 Da
IEP (calculated) 5.85
GRAVY (calculated) -0.28
Length 260 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGGSITPGE DKPEIQSPIP PNQIFILSGQ SNMAGRGGVF KDHHNNRWVW DKILPPECAP NSSILRLSAD LRWEEAHEPL HVDIDTGKVC GVGPGMAFAN
101: AVKNRLETDS AVIGLVPCAS GGTAIKEWER GSHLYERMVK RTEESRKCGG EIKAVLWYQG ESDVLDIHDA ESYGNNMDRL IKNLRHDLNL PSLPIIQVAI
201: ASGGGYIDKV REAQLGLKLS NVVCVDAKGL PLKSDNLHLT TEAQVQLGLS LAQAYLSNFC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)