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AT4G34030.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : 3-methylcrotonyl-CoA carboxylase
Curator
Summary (TAIR10)
MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.
Computational
Description (TAIR10)
3-methylcrotonyl-CoA carboxylase (MCCB); FUNCTIONS IN: biotin carboxylase activity, cobalt ion binding, methylcrotonoyl-CoA carboxylase activity, zinc ion binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acetyl-coenzyme A carboxyltransferase, N-terminal (InterPro:IPR011762), Carboxyl transferase (InterPro:IPR000022), Acetyl-coenzyme A carboxyltransferase, C-terminal (InterPro:IPR011763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G34030-MONOMERBioGrid:14831BRENDA:6.4.1.4EC:6.4.1.4eggNOG:COG4799eggNOG:KOG0540EMBL:AF059510
EMBL:AF059511EMBL:AF386926EMBL:AL021961EMBL:AL031032EMBL:AL161584EMBL:BT000384EMBL:CP002687
EnsemblPlants:AT4G34030EnsemblPlants:AT4G34030.1entrez:829549Gene3D:3.90.226.10GeneID:829549Genevisible:Q9LDD8GO:GO:0004485
GO:GO:0005524GO:GO:0005739GO:GO:0005759GO:GO:0006552GO:GO:0008270GO:GO:0050897Gramene:AT4G34030.1
hmmpanther:PTHR22855hmmpanther:PTHR22855:SF13HOGENOM:HOG000218692InParanoid:Q9LDD8IntAct:Q9LDD8InterPro:IPR000022InterPro:IPR011762
InterPro:IPR011763InterPro:IPR029045KEGG:00061+6.4.1.2KEGG:00253+6.4.1.2KEGG:00254+6.4.1.2KEGG:00620+6.4.1.2KEGG:00640+6.4.1.2
KEGG:00720+6.4.1.2KEGG:ath:AT4G34030KO:K01969MINT:MINT-8061614OMA:QCIVVANPaxDb:Q9LDD8Pfam:PF01039
Pfam:Q9LDD8Pfscan:PS50980Pfscan:PS50989PhylomeDB:Q9LDD8PRIDE:Q9LDD8PRO:PR:Q9LDD8PROSITE:PS50980
PROSITE:PS50989ProteinModelPortal:Q9LDD8Proteomes:UP000006548Reactome:R-ATH-196780Reactome:R-ATH-70895RefSeq:NP_567950.1SMR:Q9LDD8
STRING:3702.AT4G34030.1SUPFAM:SSF52096TAIR:AT4G34030tair10-symbols:MCCBUniGene:At.19955UniPathway:UPA00363unipathway:UPA00655
UniProt:Q9LDD8
Coordinates (TAIR10) chr4:+:16301298..16303949
Molecular Weight (calculated) 64016.40 Da
IEP (calculated) 8.68
GRAVY (calculated) -0.13
Length 587 amino acids
Sequence (TAIR10)
(BLAST)
001: MLRILGRRVV SASKELTSIQ QWRIRPGTDS RPDPFRTFRG LQKGFCVGIL PDGVDRNSEA FSSNSIAMEG ILSELRSHIK KVLAGGGEEA VKRNRSRNKL
101: LPRERIDRLL DPGSSFLELS QLAGHELYEE PLPSGGIITG IGPIHGRICM FMANDPTVKG GTYYPITIKK HLRAQEIAAR CRLPCIYLVD SGGAYLPKQA
201: EVFPDKENFG RVFYNESVMS SDGIPQIAIV LGSCTAGGAY IPAMADESVM VKGNGTIFLA GPPLVKAATG EEVSAEDLGG ATVHCTVSGV SDYFAQDELH
301: GLAIGRNIVK NLHMAAKQGM EGTFGSKNLV YKEPLYDINE LRSIAPVDHK QQFDVRSIIA RIVDGSEFDE FKKQYGTTLV TGFARIYGQT VGIIGNNGIL
401: FNESALKGAH FIELCSQRKI PLVFLQNITG FMVGSRAEAN GIAKAGAKMV MAVSCAKVPK ITIITGASFG AGNYAMCGRA YSPDFMFIWP NARIGIMGGA
501: QAAGVLTQIE RATKKRQGIK WTEEEEEAFK KKTVDAYERE ANPYYSTARL WDDGVIDPCD TRKVLGLCLS AALNRPLEDT RFGVFRM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)