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AT4G33920.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: mitochondrion, protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51370.1); Has 5306 Blast hits to 5302 proteins in 304 species: Archae - 0; Bacteria - 42; Metazoa - 1364; Fungi - 564; Plants - 2405; Viruses - 3; Other Eukaryotes - 928 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G33920-MONOMERBioGrid:14818EC:3.1.3.16eggNOG:COG0631
eggNOG:KOG0700EMBL:AF372953EMBL:AL031032EMBL:AL161584
EMBL:AY081718EMBL:AY087982EMBL:CP002687EnsemblPlants:AT4G33920
EnsemblPlants:AT4G33920.1entrez:829536Gene3D:3.60.40.10GeneID:829536
Genevisible:O81760GO:GO:0004722GO:GO:0046872Gramene:AT4G33920.1
hmmpanther:PTHR13832hmmpanther:PTHR13832:SF362HOGENOM:HOG000238703InParanoid:O81760
IntAct:O81760InterPro:IPR000222InterPro:IPR001932InterPro:IPR015655
KEGG:ath:AT4G33920OMA:YRDPIFQPANTHER:PTHR13832PaxDb:O81760
Pfam:O81760Pfam:PF00481Pfscan:PS51746PhylomeDB:O81760
PIR:T05220PRIDE:O81760PRO:PR:O81760PROSITE:PS01032
PROSITE:PS51746ProteinModelPortal:O81760Proteomes:UP000006548RefSeq:NP_195118.1
scanprosite:PS01032SMART:SM00332SMR:O81760STRING:3702.AT4G33920.1
SUPFAM:SSF81606TAIR:AT4G33920UniGene:At.2397UniProt:O81760
Coordinates (TAIR10) chr4:+:16260876..16262703
Molecular Weight (calculated) 42320.90 Da
IEP (calculated) 9.59
GRAVY (calculated) -0.32
Length 380 amino acids
Sequence (TAIR10)
(BLAST)
001: MLRALARPLE RCLGSRASGD GLLWQSELRP HAGGDYSIAV VQANSRLEDQ SQVFTSSSAT YVGVYDGHGG PEASRFVNRH LFPYMHKFAR EHGGLSVDVI
101: KKAFKETEEE FCGMVKRSLP MKPQMATVGS CCLVGAISND TLYVANLGDS RAVLGSVVSG VDSNKGAVAE RLSTDHNVAV EEVRKEVKAL NPDDSQIVLY
201: TRGVWRIKGI IQVSRSIGDV YLKKPEYYRD PIFQRHGNPI PLRRPAMTAE PSIIVRKLKP QDLFLIFASD GLWEHLSDET AVEIVLKHPR TGIARRLVRA
301: ALEEAAKKRE MRYGDIKKIA KGIRRHFHDD ISVIVVYLDQ NKTSSSNSKL VKQGGITAPP DIYSLHSDEA EQRRLLNVLY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)