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AT4G33690.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 543 Blast hits to 512 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 281; Fungi - 54; Plants - 72; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXSTeggNOG:ENOG4111VZAEMBL:BT010676EMBL:BT010975EMBL:CP002687EnsemblPlants:AT4G33690EnsemblPlants:AT4G33690.1
entrez:829511GeneID:829511GO:GO:0009507Gramene:AT4G33690.1hmmpanther:PTHR34684hmmpanther:PTHR34684:SF1HOGENOM:HOG000030146
KEGG:ath:AT4G33690ncoils:CoilOMA:SKEIEFGProteomes:UP000006548RefSeq:NP_195095.2STRING:3702.AT4G33690.1TAIR:AT4G33690
UniGene:At.31564UniProt:Q6NPE9
Coordinates (TAIR10) chr4:+:16175198..16176137
Molecular Weight (calculated) 28685.70 Da
IEP (calculated) 10.73
GRAVY (calculated) -1.40
Length 246 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLETENRIA SILLREAAEL RRQAEKDGVR AYLEKPNVRH RPNSRFLTAT VLGVQQANKA VETNEMWSLR SKEIEFGERL KRKSRDESSN GQSEQNNRRD
101: FLKRCTSVDE NVTTTSLSPS SSRSRSKRWQ SEDDDDEGLG DVEVKTFLQS RVKRGRGSVG AMMDEPLPCL PERELSRTSD TGDRKLVIQP ERSPLLRRRT
201: DSSSSDEEEV YKRAHRKRKE HKKKLSKKHK SKEKKRDRKK RKYGRD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)