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AT4G33670.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-linked oxidoreductase superfamily protein
Curator
Summary (TAIR10)
Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis
Computational
Description (TAIR10)
NAD(P)-linked oxidoreductase superfamily protein; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60750.1); Has 28637 Blast hits to 28630 proteins in 2499 species: Archae - 653; Bacteria - 20546; Metazoa - 1049; Fungi - 1796; Plants - 827; Viruses - 0; Other Eukaryotes - 3766 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G33670-MONOMERBioCyc:MetaCyc:AT4G33670-MONOMERBRENDA:1.1.1.316EC:1.1.1.316eggNOG:COG0667eggNOG:KOG1576EMBL:AJ417563
EMBL:AL031394EMBL:AL161583EMBL:AY050377EMBL:AY090337EMBL:CP002687EMBL:HM230668EnsemblPlants:AT4G33670
EnsemblPlants:AT4G33670.1entrez:829509Gene3D:3.20.20.100GeneID:829509Genevisible:O81884GO:GO:0005829GO:GO:0006012
GO:GO:0010349GO:GO:0019853Gramene:AT4G33670.1gramene_pathway:1.1.1.-gramene_pathway:PWY-882hmmpanther:PTHR11732hmmpanther:PTHR11732:SF14
HOGENOM:HOG000250267InParanoid:O81884InterPro:IPR001395InterPro:IPR023210KEGG:ath:AT4G33670KO:K17744OMA:IILSYCH
PANTHER:PTHR11732PaxDb:O81884Pfam:O81884Pfam:PF00248PhylomeDB:O81884PIR:T04984PRIDE:O81884
PRO:PR:O81884ProteinModelPortal:O81884Proteomes:UP000006548RefSeq:NP_195093.1SMR:O81884STRING:3702.AT4G33670.1SUPFAM:SSF51430
TAIR:AT4G33670UniGene:At.2455UniGene:At.26188UniProt:O81884
Coordinates (TAIR10) chr4:-:16169670..16171446
Molecular Weight (calculated) 34533.60 Da
IEP (calculated) 5.44
GRAVY (calculated) -0.03
Length 319 amino acids
Sequence (TAIR10)
(BLAST)
001: MTKIELRALG NTGLKVSAVG FGASPLGSVF GPVAEDDAVA TVREAFRLGI NFFDTSPYYG GTLSEKMLGK GLKALQVPRS DYIVATKCGR YKEGFDFSAE
101: RVRKSIDESL ERLQLDYVDI LHCHDIEFGS LDQIVSETIP ALQKLKQEGK TRFIGITGLP LDIFTYVLDR VPPGTVDVIL SYCHYGVNDS TLLDLLPYLK
201: SKGVGVISAS PLAMGLLTEQ GPPEWHPASP ELKSASKAAV AHCKSKGKKI TKLALQYSLA NKEISSVLVG MSSVSQVEEN VAAVTELESL GMDQETLSEV
301: EAILEPVKNL TWPSGIHQN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)