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AT4G33640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XR7VeggNOG:KOG3376EMBL:AK229299EMBL:AL031394
EMBL:AL161583EMBL:AY087101EMBL:BT025572EMBL:CP002687
EnsemblPlants:AT4G33640EnsemblPlants:AT4G33640.1entrez:829505GeneID:829505
Genevisible:Q8LBN7Gramene:AT4G33640.1hmmpanther:PTHR22739HOGENOM:HOG000030934
InParanoid:Q8LBN7InterPro:IPR027817iPTMnet:Q8LBN7KEGG:ath:AT4G33640
OMA:NVEHEVNPaxDb:Q8LBN7Pfam:PF14705Pfam:Q8LBN7
PhylomeDB:Q8LBN7PIR:T04981PRIDE:Q8LBN7PRO:PR:Q8LBN7
ProteinModelPortal:Q8LBN7Proteomes:UP000006548RefSeq:NP_567930.1SMART:SM01283
SMR:Q8LBN7STRING:3702.AT4G33640.1TAIR:AT4G33640UniGene:At.48933
UniGene:At.69903UniProt:Q8LBN7
Coordinates (TAIR10) chr4:-:16159727..16160211
Molecular Weight (calculated) 10420.40 Da
IEP (calculated) 5.72
GRAVY (calculated) -0.29
Length 95 amino acids
Sequence (TAIR10)
(BLAST)
1: MNVDEEIQKL EEEIHRLGSR QTDGSYKVTF GVLFNDDRCA NIFEALVGTL RAAKKRKIVA FEGELLLQGV HDKVEITLRP TPPPPQAAAA TAASS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)