AT4G33540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : metallo-beta-lactamase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
metallo-beta-lactamase family protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: response to arsenic, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); Has 1592 Blast hits to 1592 proteins in 436 species: Archae - 145; Bacteria - 835; Metazoa - 30; Fungi - 10; Plants - 78; Viruses - 0; Other Eukaryotes - 494 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:16130882..16133678 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39640.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.40 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||||||
| Length | 355 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASASFSAVS SLSYQFRSKE AIFSSKASCF SSTALSGRRV FGSIKAAQVT SHENPRRRTQ NVEGDIFVDN TCIDCDTCRW MVPDLFTRVD NMSAVTKQPT 101: CKEERLNALQ ALLSCPTGSI RTQTPPADIG EAQETFPLVV DKDTLPGVFH CGFHSKKSYG ATSYLILHRE GNILVDSPRY VEKLAGKIEM KGGVRYMFLT 201: HRDDVADHKK WADRFKSTRI LHSDDVEPST SDVELKLEGS GPWSIYEDVE LIHTPGHSEG SVCMFHKSLK ALFTGDHVIM TESGLSILEQ YNHGSVPLQL 301: ENVEKLINLD FNWLIPGHGR RVHFKDGDEK AKNLEALVQK HREKQLVSFS KSGKA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)