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AT4G33480.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3727 (InterPro:IPR022203); Has 348 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHW1eggNOG:ENOG41100C3EMBL:BT030102EMBL:CP002687EnsemblPlants:AT4G33480EnsemblPlants:AT4G33480.1entrez:829485
GeneID:829485Gramene:AT4G33480.1hmmpanther:PTHR36061hmmpanther:PTHR36061:SF2HOGENOM:HOG000236383InterPro:IPR022203KEGG:ath:AT4G33480
OMA:VLMASNKPfam:PF12527PhylomeDB:A2RVW1Proteomes:UP000006548RefSeq:NP_195074.2TAIR:AT4G33480UniGene:At.31580
UniGene:At.66571UniProt:A2RVW1
Coordinates (TAIR10) chr4:-:16105804..16108497
Molecular Weight (calculated) 36629.70 Da
IEP (calculated) 4.41
GRAVY (calculated) -0.33
Length 336 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFSYSLTSP SPNSTLSYSS THQFLNPSSS FPVSLSVSSP KNTRHLRLLI TSALNPQTGQ PTKKASTGSD KSSTNKKRKK KGKIAKPVED WELRDSEDAF
101: EEDDDADYSS SSSSLATFNS PPTIPKPPAG FVINETGRVL MASKKRITTV IDPTNNSPLD CVIRRVFTSS KGEDCMLLCP VDTPVQILKS TNIDGWSAVS
201: DEEVESLLPA AAYALAKIHM HLVHSGFCYT ARGGFCYTED NVFDFRTDDG QDVEGLPTEG VEITCFHLDG SHYMVYTPSD PLLFVAAKDQ NGLLQIADDE
301: LLDDPAVISA IDEETEFNAL VEEEAALLES LLGERI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)