AT4G33180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.842 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G21950.1); Has 8643 Blast hits to 8637 proteins in 1357 species: Archae - 85; Bacteria - 5901; Metazoa - 344; Fungi - 96; Plants - 652; Viruses - 2; Other Eukaryotes - 1563 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:16000282..16002055 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34846.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.35 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||
| Length | 307 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLSSYLSPT RLLEGYLRRC LRAAGLTSQT LSIDSETTIH FWGPPPLDHR SDDDRPVMLL LHGFGPSSMW QWRRQMQAFS PSAFRVYSPD LVFFGDSTSS 101: STNRTEVFQA ECMAKLMAKI GIGKYNVAGT SYGGFVAYHM AKMWPEKVEK VVIASSGINM RKCDGESLLQ RSNCECIEKV MLPSTATEFR TLMALASSWR 201: LVRMFPDALW NDVINNLYKK NRKEKIELLK GVTFGRSENL NIDSLSQEVL IVWGDKDQIF PVKMAYELKE ILGDKTKLEI IDNTSHVPQI ECAQEFNNIV 301: LRFLKGS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)