AT4G33150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme; CONTAINS InterPro DOMAIN/s: Alanine dehydrogenase/PNT, C-terminal (InterPro:IPR007698), Saccharopine dehydrogenase / Homospermidine synthase (InterPro:IPR005097), Alanine dehydrogenase/PNT, N-terminal (InterPro:IPR007886), LOR/SDH bifunctional enzyme, conserved domain (InterPro:IPR007545); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:15985479..15991069 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 117164.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.87 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1064 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MNSNGHEEEK KLGNGVVGIL AETVNKWERR TPLTPSHCAR LLHGGKDRTG ISRIVVQPSA KRIHHDALYE DVGCEISDDL SDCGLILGIK QPELEMILPE 0101: RAYAFFSHTH KAQKENMPLL DKILSERVTL CDYELIVGDH GKRLLAFGKY AGRAGLVDFL HGLGQRYLSL GYSTPFLSLG ASYMYSSLAA AKAAVISVGE 0201: EIASQGLPLG ICPLVFVFTG TGNVSLGAQE IFKLLPHTFV EPSKLPELFV KDKGISQNGI STKRVYQVYG CIITSQDMVE HKDPSKSFDK ADYYAHPEHY 0301: NPVFHEKISP YTSVLVNCMY WEKRFPCLLS TKQLQDLTKK GLPLVGICDI TCDIGGSIEF VNRATLIDSP FFRFNPSNNS YYDDMDGDGV LCMAVDILPT 0401: EFAKEASQHF GDILSGFVGS LASMTEISDL PAHLKRACIS YRGELTSLYE YIPRMRKSNP EEAQDNIIAN GVSSQRTFNI LVSLSGHLFD KFLINEALDM 0501: IEAAGGSFHL AKCELGQSAD AESYSELEVG ADDKRVLDQI IDSLTRLANP NEDYISPHRE ANKISLKIGK VQQENEIKEK PEMTKKSGVL ILGAGRVCRP 0601: AADFLASVRT ISSQQWYKTY FGADSEEKTD VHVIVASLYL KDAKETVEGI SDVEAVRLDV SDSESLLKYV SQVDVVLSLL PASCHAVVAK TCIELKKHLV 0701: TASYVDDETS MLHEKAKSAG ITILGEMGLD PGIDHMMAMK MINDAHIKKG KVKSFTSYCG GLPSPAAANN PLAYKFSWNP AGAIRAGQNP AKYKSNGDII 0801: HVDGKNLYDS AARFRVPNLP AFALECFPNR DSLVYGEHYG IESEATTIFR GTLRYEGFSM IMATLSKLGF FDSEANQVLS TGKRITFGAL LSNILNKDAD 0901: NESEPLAGEE EISKRIIKLG HSKETAAKAA KTIVFLGFNE EREVPSLCKS VFDATCYLME EKLAYSGNEQ DMVLLHHEVE VEFLESKRIE KHTATLLEFG 1001: DIKNGQTTTA MAKTVGIPAA IGALLLIEDK IKTRGVLRPL EAEVYLPALD ILQAYGIKLM EKAE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)