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AT4G33150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme; CONTAINS InterPro DOMAIN/s: Alanine dehydrogenase/PNT, C-terminal (InterPro:IPR007698), Saccharopine dehydrogenase / Homospermidine synthase (InterPro:IPR005097), Alanine dehydrogenase/PNT, N-terminal (InterPro:IPR007886), LOR/SDH bifunctional enzyme, conserved domain (InterPro:IPR007545); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1748eggNOG:KOG0172EMBL:CP002687EnsemblPlants:AT4G33150EnsemblPlants:AT4G33150.1EnsemblPlants:AT4G33150.2entrez:829452
ExpressionAtlas:F4JVY8Gene3D:3.40.50.720GeneID:829452GO:GO:0004753GO:GO:0005737GO:GO:0005829GO:GO:0019477
GO:GO:0047130GO:GO:0080167Gramene:AT4G33150.1Gramene:AT4G33150.2gramene_pathway:1.5.1.8gramene_pathway:1.5.1.9gramene_pathway:LYSINE-DEG2-PWY
InterPro:IPR005097InterPro:IPR007545InterPro:IPR007698InterPro:IPR007886InterPro:IPR016040InterPro:IPR032095ncoils:Coil
OMA:HLERREGPfam:PF03435Pfam:PF04455Pfam:PF05222Pfam:PF16653Proteomes:UP000006548Reactome:R-ATH-71064
RefSeq:NP_567914.1RefSeq:NP_849486.1SMART:SM01002SMART:SM01003SMR:F4JVY8STRING:3702.AT4G33150.1SUPFAM:SSF51735
SUPFAM:SSF52283SUPFAM:SSF55347TAIR:AT4G33150UniGene:At.20921UniProt:F4JVY8
Coordinates (TAIR10) chr4:-:15985479..15991069
Molecular Weight (calculated) 117164.00 Da
IEP (calculated) 5.87
GRAVY (calculated) -0.15
Length 1064 amino acids
Sequence (TAIR10)
(BLAST)
0001: MNSNGHEEEK KLGNGVVGIL AETVNKWERR TPLTPSHCAR LLHGGKDRTG ISRIVVQPSA KRIHHDALYE DVGCEISDDL SDCGLILGIK QPELEMILPE
0101: RAYAFFSHTH KAQKENMPLL DKILSERVTL CDYELIVGDH GKRLLAFGKY AGRAGLVDFL HGLGQRYLSL GYSTPFLSLG ASYMYSSLAA AKAAVISVGE
0201: EIASQGLPLG ICPLVFVFTG TGNVSLGAQE IFKLLPHTFV EPSKLPELFV KDKGISQNGI STKRVYQVYG CIITSQDMVE HKDPSKSFDK ADYYAHPEHY
0301: NPVFHEKISP YTSVLVNCMY WEKRFPCLLS TKQLQDLTKK GLPLVGICDI TCDIGGSIEF VNRATLIDSP FFRFNPSNNS YYDDMDGDGV LCMAVDILPT
0401: EFAKEASQHF GDILSGFVGS LASMTEISDL PAHLKRACIS YRGELTSLYE YIPRMRKSNP EEAQDNIIAN GVSSQRTFNI LVSLSGHLFD KFLINEALDM
0501: IEAAGGSFHL AKCELGQSAD AESYSELEVG ADDKRVLDQI IDSLTRLANP NEDYISPHRE ANKISLKIGK VQQENEIKEK PEMTKKSGVL ILGAGRVCRP
0601: AADFLASVRT ISSQQWYKTY FGADSEEKTD VHVIVASLYL KDAKETVEGI SDVEAVRLDV SDSESLLKYV SQVDVVLSLL PASCHAVVAK TCIELKKHLV
0701: TASYVDDETS MLHEKAKSAG ITILGEMGLD PGIDHMMAMK MINDAHIKKG KVKSFTSYCG GLPSPAAANN PLAYKFSWNP AGAIRAGQNP AKYKSNGDII
0801: HVDGKNLYDS AARFRVPNLP AFALECFPNR DSLVYGEHYG IESEATTIFR GTLRYEGFSM IMATLSKLGF FDSEANQVLS TGKRITFGAL LSNILNKDAD
0901: NESEPLAGEE EISKRIIKLG HSKETAAKAA KTIVFLGFNE EREVPSLCKS VFDATCYLME EKLAYSGNEQ DMVLLHHEVE VEFLESKRIE KHTATLLEFG
1001: DIKNGQTTTA MAKTVGIPAA IGALLLIEDK IKTRGVLRPL EAEVYLPALD ILQAYGIKLM EKAE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)