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AT4G33140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5'(3')-deoxyribonucleotidase (InterPro:IPR010708); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHHIeggNOG:ENOG41124W5EMBL:AY057570EMBL:AY133646
EMBL:CP002687EnsemblPlants:AT4G33140EnsemblPlants:AT4G33140.1entrez:829451
Gene3D:3.40.50.1000GeneID:829451GO:GO:0008253GO:GO:0009264
Gramene:AT4G33140.1hmmpanther:PTHR35134hmmpanther:PTHR35134:SF2HOGENOM:HOG000241728
InterPro:IPR010708InterPro:IPR023214KEGG:00051+3.1.3.-KEGG:00332+3.1.3.-
KEGG:00565+3.1.3.-KEGG:00600+3.1.3.-KEGG:00730+3.1.3.-KEGG:00740+3.1.3.-
KEGG:00760+3.1.3.-KEGG:ath:AT4G33140OMA:EHTLEWIPfam:PF06941
PhylomeDB:Q93ZF7Proteomes:UP000006548RefSeq:NP_567913.1STRING:3702.AT4G33140.1
SUPFAM:SSF56784TAIR:AT4G33140UniGene:At.2673UniProt:Q93ZF7
Coordinates (TAIR10) chr4:+:15981648..15984135
Molecular Weight (calculated) 40393.90 Da
IEP (calculated) 9.27
GRAVY (calculated) -0.47
Length 353 amino acids
Sequence (TAIR10)
(BLAST)
001: MLKRHSIAIL SRIASFDSHK TLMSSFTDPL FLRSLYSPRS IAIRFHGDFA HRLYNPIQIY NNNNNNSGSC NGLFKVKGGG GKPKGFTLRS CFDSHKKPDQ
101: KARALTQHRR FLHDLGSGPS EERAAAGTTD LADGRGAYLR TRFQGNDKIV VAVDIDEVLG NFVSALNRFI ADRYLSNHSV SEYHVYEFFK IWNCSRNEAD
201: LRVHEFFKTS YFKKGIHPLP GAHKTLHKLS KYCDMSVVTS RQNAIKEHTL EWIEIHFPGL FKQIHFGNHF ALHGESRPKS EICRSFGAEI LIDDNPRYAE
301: ECANIGMKVL LFDYENSYPW SKTESVDRHP LVTRVHNWEE VEQQILSLAV SKC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)