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AT4G33010.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycine decarboxylase P-protein 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycine decarboxylase P-protein 1 (GLDP1); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, protein binding; INVOLVED IN: glycine catabolic process, response to cadmium ion, glycine decarboxylation via glycine cleavage system; LOCATED IN: mitochondrion, apoplast, glycine cleavage complex, chloroplast, chloroplast envelope; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Glycine cleavage system P-protein (InterPro:IPR003437), Glycine cleavage system P-protein-like (InterPro:IPR020581), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Glycine cleavage system P-protein, N-terminal (InterPro:IPR020580); BEST Arabidopsis thaliana protein match is: glycine decarboxylase P-protein 2 (TAIR:AT2G26080.1); Has 12463 Blast hits to 11454 proteins in 1943 species: Archae - 255; Bacteria - 5318; Metazoa - 139; Fungi - 214; Plants - 99; Viruses - 0; Other Eukaryotes - 6438 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G33010-MONOMERBioCyc:ARA:GQT-949-MONOMERBioGrid:14723EC:1.4.4.2eggNOG:COG0403eggNOG:COG1003eggNOG:KOG2040
EMBL:AL031804EMBL:AL161582EMBL:AY042800EMBL:AY063903EMBL:AY065004EMBL:AY091186EMBL:AY128922
EMBL:BT000446EMBL:BT001132EMBL:CP002687EnsemblPlants:AT4G33010EnsemblPlants:AT4G33010.1entrez:829438ExpressionAtlas:Q94B78
Gene3D:3.40.640.10GeneID:829438Genevisible:Q94B78GO:GO:0004375GO:GO:0005739GO:GO:0005960GO:GO:0006546
GO:GO:0009507GO:GO:0009534GO:GO:0009570GO:GO:0009941GO:GO:0016594GO:GO:0019464GO:GO:0046686
GO:GO:0048046gramene_pathway:1.4.4.2gramene_pathway:GLYCLEAV-PWYHAMAP:MF_00711hmmpanther:PTHR11773hmmpanther:PTHR11773:SF4HOGENOM:HOG000239369
InParanoid:Q94B78IntAct:Q94B78InterPro:IPR003437InterPro:IPR015421InterPro:IPR015424InterPro:IPR020580InterPro:IPR020581
iPTMnet:Q94B78MINT:MINT-8070384OMA:CSDAHAIPANTHER:PTHR11773PaxDb:Q94B78Pfam:PF02347Pfam:Q94B78
PhylomeDB:Q94B78PIR:T05309PRIDE:Q94B78PRO:PR:Q94B78ProteinModelPortal:Q94B78Proteomes:UP000006548Reactome:R-ATH-6783984
RefSeq:NP_195027.1SMR:Q94B78STRING:3702.AT4G33010.1SUPFAM:SSF53383TAIR:AT4G33010tair10-symbols:AtGLDP1tair10-symbols:GLDP1
TIGRfam:TIGR00461TIGRFAMs:TIGR00461UniGene:At.22214UniGene:At.24550UniProt:Q94B78
Coordinates (TAIR10) chr4:-:15926852..15931150
Molecular Weight (calculated) 112932.00 Da
IEP (calculated) 6.98
GRAVY (calculated) -0.14
Length 1037 amino acids
Sequence (TAIR10)
(BLAST)
0001: MERARRLAYR GIVKRLVNDT KRHRNAETPH LVPHAPARYV SSLSPFISTP RSVNHTAAFG RHQQTRSISV DAVKPSDTFP RRHNSATPDE QTHMAKFCGF
0101: DHIDSLIDAT VPKSIRLDSM KFSKFDAGLT ESQMIQHMVD LASKNKVFKS FIGMGYYNTH VPTVILRNIM ENPAWYTQYT PYQAEISQGR LESLLNFQTV
0201: ITDLTGLPMS NASLLDEGTA AAEAMAMCNN ILKGKKKTFV IASNCHPQTI DVCKTRADGF DLKVVTSDLK DIDYSSGDVC GVLVQYPGTE GEVLDYAEFV
0301: KNAHANGVKV VMATDLLALT VLKPPGEFGA DIVVGSAQRF GVPMGYGGPH AAFLATSQEY KRMMPGRIIG ISVDSSGKQA LRMAMQTREQ HIRRDKATSN
0401: ICTAQALLAN MAAMYAVYHG PAGLKSIAQR VHGLAGIFSL GLNKLGVAEV QELPFFDTVK IKCSDAHAIA DAASKSEINL RVVDSTTITA SFDETTTLDD
0501: VDKLFKVFAS GKPVPFTAES LAPEVQNSIP SSLTRESPYL THPIFNMYHT EHELLRYIHK LQSKDLSLCH SMIPLGSCTM KLNATTEMMP VTWPSFTDIH
0601: PFAPVEQAQG YQEMFENLGD LLCTITGFDS FSLQPNAGAA GEYAGLMVIR AYHMSRGDHH RNVCIIPVSA HGTNPASAAM CGMKIITVGT DAKGNINIEE
0701: VRKAAEANKD NLAALMVTYP STHGVYEEGI DEICNIIHEN GGQVYMDGAN MNAQVGLTSP GFIGADVCHL NLHKTFCIPH GGGGPGMGPI GVKNHLAPFL
0801: PSHPVIPTGG IPQPEKTAPL GAISAAPWGS ALILPISYTY IAMMGSGGLT DASKIAILNA NYMAKRLEKH YPVLFRGVNG TVAHEFIIDL RGFKNTAGIE
0901: PEDVAKRLMD YGFHGPTMSW PVPGTLMIEP TESESKAELD RFCDALISIR EEIAQIEKGN ADVQNNVLKG APHPPSLLMA DTWKKPYSRE YAAFPAPWLR
1001: SSKFWPTTGR VDNVYGDRKL VCTLLPEEEQ VAAAVSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)