suba logo
AT4G33000.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : calcineurin B-like protein 10
Curator
Summary (TAIR10)
Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis.
Computational
Description (TAIR10)
calcineurin B-like protein 10 (CBL10); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calcineurin B-like 3 (TAIR:AT4G26570.1); Has 7647 Blast hits to 7617 proteins in 798 species: Archae - 0; Bacteria - 10; Metazoa - 3628; Fungi - 1210; Plants - 1915; Viruses - 0; Other Eukaryotes - 884 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5126eggNOG:KOG0034EMBL:HE802852EMBL:HE802854EMBL:HE802855EMBL:HE802857EMBL:HE802858
EMBL:HE802860EMBL:HE802861EMBL:HE802862EMBL:HE802863EMBL:HE802869EMBL:HE802871EnsemblPlants:AT4G33000
EnsemblPlants:AT4G33000.1entrez:829437ExpressionAtlas:M5BEI3ExpressionAtlas:Q7FRS8Gene3D:1.10.238.10GeneID:829437GO:GO:0005509
Gramene:AT4G33000.1hmmpanther:PTHR23056hmmpanther:PTHR23056:SF26InterPro:IPR002048InterPro:IPR011992InterPro:IPR018247OMA:CQHADLE
Pfam:PF13499Pfam:PF13833Pfam:Q7FRS8Pfscan:PS50222PhylomeDB:M5BEI3PROSITE:PS00018PROSITE:PS50222
RefSeq:NP_195026.1scanprosite:PS00018SMART:SM00054SMR:M5BEI3STRING:3702.AT4G33000.1SUPFAM:SSF47473tair10-symbols:ATCBL10
tair10-symbols:CBL10UniGene:At.31618UniProt:M5BEI3UniProt:Q7FRS8
Coordinates (TAIR10) chr4:+:15924349..15926398
Molecular Weight (calculated) 29344.00 Da
IEP (calculated) 4.46
GRAVY (calculated) -0.08
Length 256 amino acids
Sequence (TAIR10)
(BLAST)
001: MTTGRPNNIL ALKISTRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK
101: EELRLALFQA PYGENLFLDR VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS AILLESDMML SDELLTMIID
201: KTFADADSDK DGKISKDEWN VYVHKHPSLL KNMTLPYLKD VTTAFPSFIF NTEVED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)