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AT4G32960.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.997
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits to 106 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Protein Annotations
DNASU:829433eggNOG:ENOG410IK4PeggNOG:ENOG4111PEWEMBL:AL031804EMBL:AL161582EMBL:BT010907EMBL:CP002687
EnsemblPlants:AT4G32960EnsemblPlants:AT4G32960.1entrez:829433GeneID:829433GO:GO:0045739GO:GO:0070531GO:GO:0070552
Gramene:AT4G32960.1hmmpanther:PTHR15660hmmpanther:PTHR15660:SF1HOGENOM:HOG000030040IntAct:O82638InterPro:IPR026126KEGG:ath:AT4G32960
OMA:GYIFESGPANTHER:PTHR15660PhylomeDB:O82638PIR:T05304Proteomes:UP000006548RefSeq:NP_195022.1STRING:3702.AT4G32960.1
TAIR:AT4G32960UniGene:At.31623UniGene:At.67258UniProt:O82638
Coordinates (TAIR10) chr4:-:15908785..15910141
Molecular Weight (calculated) 29425.40 Da
IEP (calculated) 7.17
GRAVY (calculated) -0.23
Length 264 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)