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AT4G32860.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JQSQeggNOG:ENOG4111DXSEMBL:BT010829EMBL:BT011298EMBL:CP002687EnsemblPlants:AT4G32860EnsemblPlants:AT4G32860.1
entrez:829422GeneID:829422Gramene:AT4G32860.1hmmpanther:PTHR33265hmmpanther:PTHR33265:SF8HOGENOM:HOG000237616InterPro:IPR008480
KEGG:ath:AT4G32860OMA:LEYEFSCPfam:PF05553PhylomeDB:Q6NNI9Proteomes:UP000006548RefSeq:NP_195012.2TAIR:AT4G32860
UniGene:At.31630UniProt:Q6NNI9
Coordinates (TAIR10) chr4:-:15856710..15857309
Molecular Weight (calculated) 22760.30 Da
IEP (calculated) 10.53
GRAVY (calculated) -0.52
Length 199 amino acids
Sequence (TAIR10)
(BLAST)
001: MQIHDDMEVC STVTTKKLSS LAKLILFTIQ KVSDASRHKL LTTLDPHLLA KRGKILRKSL NEAVSTSHSR ITCRPSDHQD VRSSFISPVP LQLEYEFSCS
101: STPPRRSYAT TVSKGRRSNG SHNRPLINKR QRQAYIRYNT LPKVRDSIWD RHVAAAVFPD VASSTGTMES CHVDRAAEEF IQSFYRQLRL QKWMMAQEV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)