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AT4G32680.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.994
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1XKeggNOG:ENOG410YZTUEMBL:CP002687EnsemblPlants:AT4G32680
EnsemblPlants:AT4G32680.1entrez:829403GeneID:829403GO:GO:0016021
Gramene:AT4G32680.1InParanoid:F4JV40KEGG:ath:AT4G32680OMA:ASEYARM
PaxDb:F4JV40PRIDE:F4JV40Proteomes:UP000006548RefSeq:NP_567900.1
TAIR:AT4G32680TMHMM:TMhelixUniGene:At.2239UniProt:F4JV40
Coordinates (TAIR10) chr4:-:15763462..15765039
Molecular Weight (calculated) 30197.20 Da
IEP (calculated) 5.04
GRAVY (calculated) 0.11
Length 282 amino acids
Sequence (TAIR10)
(BLAST)
001: MASNSREARR RKILDRGSDR LAFITGQING VPSPPPSDST SSLSQSDLQT DQSLPDTIPP RDQILKAQEI AFTSHQDNIS DAAMLENVDH IIHQSREEPL
101: QPQRHAETLA EASASDPRDT TTIQPPPTTS SVQNPSVVDL GASQAFIPVV SFVNAITPKH IGAAIDASEY ARMFTALAIA LVVILSHLGF SSLGNIVSFR
201: PVFLLVLTDA TIVLGRVLLS HRGDSSSASG TVMSGQGIVD QVGNALETVM MVKKIMDALL MDFSLYAVIL ICGLLVTQSI FP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)