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AT4G32470.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:22923678 (2012): mitochondrion
  • PMID:22215637 (2012): plasma membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:18189341 (2008): mitochondrion
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): unclear
  • PMID:15276431 (2004): mitochondrion
  • PMID:14671022 (2004): mitochondrion
  • PMID:11743115 (2001): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytochrome bd ubiquinol oxidase, 14kDa subunit
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cytochrome bd ubiquinol oxidase, 14kDa subunit; FUNCTIONS IN: ubiquinol-cytochrome-c reductase activity; INVOLVED IN: mitochondrial electron transport, ubiquinol to cytochrome c; LOCATED IN: mitochondrion, plasma membrane, plastid, mitochondrial respiratory chain complex III, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome d ubiquinol oxidase, 14kDa subunit (InterPro:IPR003197); BEST Arabidopsis thaliana protein match is: Cytochrome bd ubiquinol oxidase, 14kDa subunit (TAIR:AT5G25450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioGrid:14668eggNOG:ENOG4111V1GeggNOG:KOG3440EMBL:AF324709EMBL:AF326874EMBL:AF339695EMBL:AF361839
EMBL:AL034567EMBL:AL161581EMBL:AY066050EMBL:AY087333EMBL:CP002687EnsemblPlants:AT4G32470EnsemblPlants:AT4G32470.1
entrez:829382ExpressionAtlas:Q9SUU5Gene3D:1.10.1090.10GeneID:829382Genevisible:Q9SUU5GO:GO:0005739GO:GO:0005750
GO:GO:0005774GO:GO:0006122GO:GO:0009536GO:GO:0016020hmmpanther:PTHR12022HOGENOM:HOG000188221InParanoid:Q9SUU5
IntAct:Q9SUU5InterPro:IPR003197KEGG:ath:AT4G32470KO:K00417OMA:DIKEAMNPANTHER:PTHR12022PaxDb:Q9SUU5
Pfam:PF02271Pfam:Q9SUU5PhylomeDB:Q9SUU5PIR:T05357PIRSF:PIRSF000022PRIDE:Q9SUU5PRO:PR:Q9SUU5
ProDom:PD008153ProteinModelPortal:Q9SUU5Proteomes:UP000006548RefSeq:NP_194973.1SMR:Q9SUU5STRING:3702.AT4G32470.1SUPFAM:SSF81524
TAIR:AT4G32470UniGene:At.21319UniProt:Q9SUU5
Coordinates (TAIR10) chr4:-:15669641..15671095
Molecular Weight (calculated) 14527.90 Da
IEP (calculated) 10.16
GRAVY (calculated) -0.63
Length 122 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLLKAFID PKKNFLARMH MKAISTRLRR YGLRYDDLYD QYYSMDIKEA MNRLPREVVD ARNQRLKRAM DLSMKHEYLP KDLQAVQTPF RGYLQDMLAL
101: VERESKEREA LGALPLYQRT LP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)