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AT4G32295.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.969
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWQUeggNOG:ENOG4111PZ6EMBL:BT003832EMBL:BT005186EMBL:CP002687EnsemblPlants:AT4G32295EnsemblPlants:AT4G32295.1
entrez:829364ExpressionAtlas:Q84JY3GeneID:829364Gramene:AT4G32295.1hmmpanther:PTHR35300hmmpanther:PTHR35300:SF1HOGENOM:HOG000015170
IntAct:Q84JY3OMA:RIVCEIHPhylomeDB:Q84JY3Proteomes:UP000006548RefSeq:NP_680756.1SMR:Q84JY3STRING:3702.AT4G32295.1
TAIR:AT4G32295UniGene:At.44173UniProt:Q84JY3
Coordinates (TAIR10) chr4:+:15592960..15594080
Molecular Weight (calculated) 26999.20 Da
IEP (calculated) 8.55
GRAVY (calculated) -0.62
Length 238 amino acids
Sequence (TAIR10)
(BLAST)
001: MPRPGPRPYD CIRRAWHSDR HQPMRGLLIQ EIFRIVCEIH SQSTRKNTEW QEKLPVVVLR AEEIMYSKAN SEAEYMDMKT LLDRTNDAIN TIIRLDETTE
101: TGEFLQPCIE AALHLGCTPR RASRSQRNIN PRCYLSQDST NLDNMLSQVF MKPNNFAPKN LAVAQENCPV SKYSAYPLCY SFRPISDSCK SKNSRPASLI
201: DATNGITFGG CECDLSLRLG PLGPPTQKRS KISSNNNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)