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AT4G32280.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : indole-3-acetic acid inducible 29
Curator
Summary (TAIR10)
Auxin inducible protein.
Computational
Description (TAIR10)
indole-3-acetic acid inducible 29 (IAA29); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone, response to red light, response to far red light; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 10 (TAIR:AT1G04100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:14647eggNOG:ENOG410J043eggNOG:ENOG410ZN8ZEMBL:AF380646
EMBL:AL021811EMBL:AL161580EMBL:AY054137EMBL:CP002687
EnsemblPlants:AT4G32280EnsemblPlants:AT4G32280.1entrez:829361ExpressionAtlas:Q93WC4
GeneID:829361Genevisible:Q93WC4GO:GO:0003700GO:GO:0005634
GO:GO:0006351GO:GO:0009733GO:GO:0009734GO:GO:0010114
GO:GO:0010218Gramene:AT4G32280.1HOGENOM:HOG000238261IntAct:Q93WC4
InterPro:IPR000270InterPro:IPR033389KEGG:ath:AT4G32280KO:K14484
OMA:NSTRFTIPaxDb:Q93WC4Pfam:PF02309Pfam:Q93WC4
Pfscan:PS51745PhylomeDB:Q93WC4PIR:T05400PRIDE:Q93WC4
PRO:PR:Q93WC4PROSITE:PS51745ProteinModelPortal:Q93WC4Proteomes:UP000006548
RefSeq:NP_567891.1SMR:Q93WC4STRING:3702.AT4G32280.1SUPFAM:SSF54277
TAIR:AT4G32280tair10-symbols:IAA29UniGene:At.19102UniProt:Q2VWA0
UniProt:Q93WC4
Coordinates (TAIR10) chr4:+:15583479..15584628
Molecular Weight (calculated) 28611.60 Da
IEP (calculated) 6.28
GRAVY (calculated) -0.56
Length 251 amino acids
Sequence (TAIR10)
(BLAST)
001: MELDLGLSLS PHKSSKLGFN FDLNKHCAIE GAASCLGTEK LRFEATFGLG NVEENCYMPK QRLFALNGQP NEEDEDPLES ESSIVYDDEE ENSEVVGWPP
101: VKTCMIKYGS YHHRHIRNHH HCPYHHRGRR ITAMNNNISN PTTATVGSSS SSSISSRSSM YVKVKMDGVA IARKVDIKLF NSYESLTNSL ITMFTEYEDC
201: DREDTNYTFT FQGKEGDWLL RGDVTWKIFA ESVHRISIIR DRPCAYTRCL F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)