AT4G32160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phox (PX) domain-containing protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phox (PX) domain-containing protein; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: Phox (PX) domain-containing protein (TAIR:AT2G25350.1); Has 33521 Blast hits to 21186 proteins in 1483 species: Archae - 481; Bacteria - 3615; Metazoa - 17372; Fungi - 2745; Plants - 1628; Viruses - 165; Other Eukaryotes - 7515 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:15529056..15532892 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 81815.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.25 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.69 | ||||||||||||||||||||||||||||||||
| Length | 723 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMQRRSPPKH RHDGTSPLPL GMDWSPPPRK WNGRDTVWPH DPRTGWSYCV TIPSWIVLPK SRNSDPVVFY RVQVSVQSPE GITTMRGVLR RFNDFLKLLT 101: DLKRTFPRKG FPSAPPKGLL RMKSRAVLEE RRCSLEEWIT KLLSDIELAR SVVVASFLEL EAAARSACQD VDQNASDSNN DRSSTSSSPM VHPSLSLFHA 201: GGSTLTSDYG SDTAYETSEV GSPSVGQDDI SEIGTEDLTL DEDLTLTNPI EKLVNFSMSN IDEGLSMSET ILEQLEDFPK HKVRSRYVNN ILGKDVYNGN 301: ASKGVFLANN GSRLLSEPEP STHSVMHDRN DSAERFALHT GQTSTSGLLI SSRDSHLDLR QGPGVSLGTG LVCNPERQGS AQIVLPLELR NKLNRILLAT 401: NERLVNAKTD MEDLIARLNQ EIAVKDYLNK KVNDLEGELE TTKQRSKENL EQAIMSERER FNQMQWDMEE LRQKSYEMEM KLKSREDGSS HAEPTVQSTI 501: SEKHVLSKEL DARKQQLEDL SRRYEELEAK SKADMKVLVK EVKSLRRSHV ELEKELTHSL TDKTNAEKLL QEERKLLENT VAARKKLLSD CRILHDRLKE 601: YNLNLSMDGN GNFVDDSTTI SDVLRLLSIS DDQIEEAQLL SGFDENAAAE DIDKTLSMDT ETRIMEDELR KILANIFVEN AKLRKQVNSA MLRALQKDVK 701: TTEDVNEENS DEKDEASRET LKR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)