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AT4G32150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24556575 (2014): plasma membrane
  • PMID:24556575 (2014): plant-type vacuole
  • PMID:15876431 (2005): plant-type vacuole
  • PMID:15342965 (2004): plant-type vacuole
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:23990937 (2013): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : vesicle-associated membrane protein 711
Curator
Summary (TAIR10)
AtVAMP711 is a member of Synaptobrevin-like AtVAMP7C, v-SNARE (soluble N-ethyl-maleimide sensitive factor attachment protein receptors) protein family. SNAREs have been divided into four subgroups: Qa-, Qb-, Qc- and R-SNAREs. R-SNAREs are classified into three groups, the Sec22-, YKT6- and VAMP7-like R-SNAREs. One R-SNARE and three Q-SNAREs (one of each subgroup) form the trans-SNARE complex, which governs specific membrane fusions. VAMP7 proteins consist of three distinct domain, the N-terminal longin-domain (LD), the SNARE motif (SNM) and a transmembrane domain. In spite of the high similarities among the VAMP7 proteins, they show different subcellular localizations. VAMP7C is vacuolar-localized and its LD is essential for the correct localization. Generally, it is suggested that the complete LD is the determinant of subcellular sorting in both animal and plant R-SNAREs.
Computational
Description (TAIR10)
vesicle-associated membrane protein 711 (VAMP711); INVOLVED IN: intermembrane transport, response to salt stress, cellular membrane fusion, response to abscisic acid stimulus, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1); Has 2432 Blast hits to 2430 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 955; Fungi - 502; Plants - 549; Viruses - 3; Other Eukaryotes - 423 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5143eggNOG:KOG0859EMBL:AK226405EnsemblPlants:AT4G32150EnsemblPlants:AT4G32150.1entrez:829347ExpressionAtlas:Q0WWE7
Gene3D:1.10.3840.10Gene3D:3.30.450.50GeneID:829347GO:GO:0016021GO:GO:0016192Gramene:AT4G32150.1hmmpanther:PTHR21136
hmmpanther:PTHR21136:SF104InterPro:IPR001388InterPro:IPR010908InterPro:IPR011012KEGG:ath:AT4G32150KO:K08515OMA:NDDINQV
PaxDb:Q0WWE7Pfam:O49377Pfam:PF00957Pfam:PF13774Pfscan:PS50859Pfscan:PS50892PhylomeDB:Q0WWE7
PRIDE:Q0WWE7PRINTS:PR00219PROSITE:PS00417PROSITE:PS50859PROSITE:PS50892ProteinModelPortal:Q0WWE7RefSeq:NP_194942.1
scanprosite:PS00417SMART:SM01270SMR:Q0WWE7STRING:3702.AT4G32150.1SUPFAM:SSF58038SUPFAM:SSF64356TAIR:AT4G32150
tair10-symbols:ATVAMP711tair10-symbols:VAMP711TMHMM:TMhelixUniGene:At.25445UniProt:O49377UniProt:Q0WWE7
Coordinates (TAIR10) chr4:-:15526407..15527651
Molecular Weight (calculated) 25040.40 Da
IEP (calculated) 9.39
GRAVY (calculated) -0.07
Length 219 amino acids
Sequence (TAIR10)
(BLAST)
001: MAILYALVAR GTVVLSEFTA TSTNASTIAK QILEKVPGDN DSNVSYSQDR YVFHVKRTDG LTVLCMAEET AGRRIPFAFL EDIHQRFVRT YGRAVHTALA
101: YAMNEEFSRV LSQQIDYYSN DPNADRINRI KGEMNQVRGV MIENIDKVLD RGERLELLVD KTANMQGNTF RFRKQARRFR SNVWWRNCKL TVLLILLLLV
201: IIYIAVAFLC HGPTLPSCI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)