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AT4G31410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1644)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF1644); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1644) (TAIR:AT3G24740.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIZ8eggNOG:ENOG410YCWJEMBL:AK316865EMBL:AY074848EMBL:AY085434EMBL:AY097353EMBL:CP002687
EnsemblPlants:AT4G31410EnsemblPlants:AT4G31410.1EnsemblPlants:AT4G31410.2entrez:829268GeneID:829268Gramene:AT4G31410.1Gramene:AT4G31410.2
hmmpanther:PTHR31197hmmpanther:PTHR31197:SF4InterPro:IPR012866KEGG:ath:AT4G31410OMA:DDTGEDYPfam:PF07800PhylomeDB:Q8S9L2
Proteomes:UP000006548RefSeq:NP_567874.1RefSeq:NP_849480.1TAIR:AT4G31410UniGene:At.1856UniGene:At.63744UniProt:Q8S9L2
Coordinates (TAIR10) chr4:+:15244259..15245474
Molecular Weight (calculated) 35610.10 Da
IEP (calculated) 4.84
GRAVY (calculated) -0.84
Length 308 amino acids
Sequence (TAIR10)
(BLAST)
001: MALEQQHVCE KRLQAKTFST QEFQLTLNWD DLTCPICLDF PHNGVLLQCS SYGNGCRAFV CNTDHLHSNC LDRFISACGT ESPPAPDEPR SKVLEESCKP
101: VCPLCRGEVT GWLVVEEARL RLDEKKRCCE EERCRFMGTY LELRKHAQSE HPDSRPSEID PARKLDWENF QQSSEIIDVL STIHSEVPRG VVLGDYVIEY
201: GDDDTGDEFE DVPNNEGNWW TSCILYQMFD NIRNARNRRR SRMSESRRGS RRSSYENSNS DDSSVASIEF PEYRVDEIDD EFISTSGANR SSSMHQSSRR
301: RRTRFYEN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)