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AT4G31330.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.840
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function, DUF599
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function, DUF599; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF599 (InterPro:IPR006747); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF599 (TAIR:AT5G10580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEH0eggNOG:ENOG4111JFKEMBL:AF360350EMBL:AY051050EMBL:CP002687EnsemblPlants:AT4G31330EnsemblPlants:AT4G31330.1
entrez:829260GeneID:829260GO:GO:0016021Gramene:AT4G31330.1hmmpanther:PTHR31881hmmpanther:PTHR31881:SF6InterPro:IPR006747
KEGG:ath:AT4G31330OMA:MEWRECYPfam:PF04654PhylomeDB:Q9C5C1Proteomes:UP000006548RefSeq:NP_567872.1TAIR:AT4G31330
TMHMM:TMhelixUniGene:At.20206UniProt:Q9C5C1
Coordinates (TAIR10) chr4:+:15202354..15203151
Molecular Weight (calculated) 27281.90 Da
IEP (calculated) 8.59
GRAVY (calculated) 0.50
Length 239 amino acids
Sequence (TAIR10)
(BLAST)
001: MEWRECYLDV ILVPLGLMVY ASYHVYLWHK LRTQPLTTII GTNARARRFW VASIIKDNDK KNILAVQTLR NCIMGSTLMA TTSILLCAGL AAVLSSTYAV
101: KKPLNDAVFG ARGEFMVALK YVTILTIFLF SFFSHSLSIR FINQVNILIN TPFPPEELED EMMMTAEEYV AELLERGFIL NTVGNRLFYA ALPLMLWIFG
201: PVLVFLCSVV MVPLLYNLDF FFFGKERRKL DQKSSFGSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)