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AT4G31310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AIG2-like (avirulence induced gene) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AIG2-like (avirulence induced gene) family protein; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT2G24390.1); Has 337 Blast hits to 337 proteins in 100 species: Archae - 29; Bacteria - 60; Metazoa - 0; Fungi - 74; Plants - 104; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXBIeggNOG:ENOG410XV5JEMBL:BT030065EMBL:CP002687
EnsemblPlants:AT4G31310EnsemblPlants:AT4G31310.1entrez:829258Gene3D:3.10.490.10
GeneID:829258Gramene:AT4G31310.1hmmpanther:PTHR31544HOGENOM:HOG000236377
InterPro:IPR009288InterPro:IPR013024KEGG:ath:AT4G31310OMA:KLQVETY
Pfam:PF06094PhylomeDB:A2RVS4Proteomes:UP000006548RefSeq:NP_194859.2
SMR:A2RVS4STRING:3702.AT4G31310.1SUPFAM:SSF110857TAIR:AT4G31310
UniGene:At.50387UniGene:At.67325UniProt:A2RVS4
Coordinates (TAIR10) chr4:+:15191325..15192337
Molecular Weight (calculated) 20123.80 Da
IEP (calculated) 4.77
GRAVY (calculated) -0.69
Length 172 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSGKAAYDL FVYGSLQEPE VVYVLLNRVP DHVSAVLSGF HRFRLKGRVY PTILPDGTGK VNGKVLKGIT DDELKMLDEF EDVEYDRKTV EVMLTDTSEK
101: LQVETYVWKN KDDPDLYGEW DFEEWRQHDK EDFVTATKKF LENRRLPEAK TRMDTFKTFF KQDLENGKPL DS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)