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AT4G30960.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 0.445
vacuole 0.274
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : SOS3-interacting protein 3
Curator
Summary (TAIR10)
Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance.
Computational
Description (TAIR10)
SOS3-interacting protein 3 (SIP3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 20 (TAIR:AT5G45820.1); Has 129448 Blast hits to 127362 proteins in 4509 species: Archae - 159; Bacteria - 15496; Metazoa - 47121; Fungi - 13315; Plants - 31167; Viruses - 523; Other Eukaryotes - 21667 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G30960-MONOMERBioGrid:14508DIP:DIP-34749NEC:2.7.11.1eggNOG:COG0515eggNOG:KOG0583EMBL:AF285106
EMBL:AF339145EMBL:AF436831EMBL:AL022198EMBL:AL161578EMBL:AY035046EMBL:AY051051EMBL:CP002687
EnsemblPlants:AT4G30960EnsemblPlants:AT4G30960.1entrez:829221GeneID:829221Genevisible:O65554GO:GO:0004674GO:GO:0005524
GO:GO:0005783GO:GO:0007165GO:GO:0007275GO:GO:0009414GO:GO:0009651GO:GO:0010540GO:GO:0042538
Gramene:AT4G30960.1hmmpanther:PTHR24347hmmpanther:PTHR24347:SF168HOGENOM:HOG000233016InParanoid:O65554IntAct:O65554InterPro:IPR000719
InterPro:IPR004041InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441InterPro:IPR018451InterPro:IPR020636iPTMnet:O65554
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:ath:AT4G30960OMA:ISKVMDSPANTHER:PTHR24347PaxDb:O65554Pfam:O65554
Pfam:PF00069Pfam:PF03822Pfscan:PS50011Pfscan:PS50816PhylomeDB:O65554PIR:E85362PRIDE:O65554
PRO:PR:O65554PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS50816ProteinModelPortal:O65554Proteomes:UP000006548
RefSeq:NP_194825.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:O65554STRING:3702.AT4G30960.1SUPFAM:SSF56112
TAIR:AT4G30960tair10-symbols:ATCIPK6tair10-symbols:CIPK6tair10-symbols:SIP3tair10-symbols:SNRK3.14UniGene:At.2154UniProt:O65554
Coordinates (TAIR10) chr4:+:15067400..15068725
Molecular Weight (calculated) 49359.50 Da
IEP (calculated) 9.32
GRAVY (calculated) -0.31
Length 441 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGAKPVENG SDGGSSTGLL HGRYELGRLL GHGTFAKVYH ARNIQTGKSV AMKVVGKEKV VKVGMVDQIK REISVMRMVK HPNIVELHEV MASKSKIYFA
101: MELVRGGELF AKVAKGRLRE DVARVYFQQL ISAVDFCHSR GVYHRDLKPE NLLLDEEGNL KVTDFGLSAF TEHLKQDGLL HTTCGTPAYV APEVILKKGY
201: DGAKADLWSC GVILFVLLAG YLPFQDDNLV NMYRKIYRGD FKCPGWLSSD ARRLVTKLLD PNPNTRITIE KVMDSPWFKK QATRSRNEPV AATITTTEED
301: VDFLVHKSKE ETETLNAFHI IALSEGFDLS PLFEEKKKEE KREMRFATSR PASSVISSLE EAARVGNKFD VRKSESRVRI EGKQNGRKGK LAVEAEIFAV
401: APSFVVVEVK KDHGDTLEYN NFCSTALRPA LKDIFWTSTP A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)