AT4G30550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Class I glutamine amidotransferase-like superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity, acyltransferase activity; INVOLVED IN: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine; LOCATED IN: endomembrane system, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homoserine O-succinyltransferase (InterPro:IPR005697), Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT2G23970.1); Has 7193 Blast hits to 7193 proteins in 1745 species: Archae - 322; Bacteria - 3933; Metazoa - 5; Fungi - 197; Plants - 101; Viruses - 0; Other Eukaryotes - 2635 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:14925618..14926713 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28226.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.22 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 249 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVVIEQKKRF ALFLATCDSE FVKKTYGGYF NVFVSTFGEE GEQWDLFRVI DGQFPDENDL DKYDGFVISG SPHDAFGDAD WIVKLCEVCQ KLDHMKKKVL 101: GICFGHQIIT RVKGGKIGRA LKGADMGLRS ITIAKDNEKL RGYFGDVEVP ASLAIIKCHQ DEVLELPESA TLLASSEVCN VEMFSIGDHF FCIQGHPEYN 201: KEILFEIVDR VLNMKLMEQE FADKAKSTME TAQPDRILWQ KLCKNFLKG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)