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AT4G30470.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.461
plasma membrane 0.362
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G23910.1); Has 3688 Blast hits to 3683 proteins in 622 species: Archae - 2; Bacteria - 557; Metazoa - 88; Fungi - 385; Plants - 2025; Viruses - 0; Other Eukaryotes - 631 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G30470-MONOMEReggNOG:COG0451eggNOG:KOG1502EMBL:AL161577EMBL:AY042886EMBL:BT001179EMBL:CP002687
EnsemblPlants:AT4G30470EnsemblPlants:AT4G30470.1entrez:829170Gene3D:3.40.50.720GeneID:829170GO:GO:0003824GO:GO:0050662
Gramene:AT4G30470.1hmmpanther:PTHR10366hmmpanther:PTHR10366:SF390InterPro:IPR016040KEGG:ath:AT4G30470ncoils:CoilOMA:FCCLDSP
Pfam:PF01370Pfam:PF13460PhylomeDB:Q9M0B3PIR:D85356Proteomes:UP000006548RefSeq:NP_194776.1SMR:Q9M0B3
STRING:3702.AT4G30470.1SUPFAM:SSF51735TAIR:AT4G30470UniGene:At.23662UniProt:Q9M0B3
Coordinates (TAIR10) chr4:+:14894263..14896506
Molecular Weight (calculated) 34197.80 Da
IEP (calculated) 4.78
GRAVY (calculated) -0.19
Length 303 amino acids
Sequence (TAIR10)
(BLAST)
001: MDHDKSTSCC CVLDASTYVG FWILKKLLSR GYSVHAAIRR NGESEIEEMI REMETTEERL VVYDVDVLDY QSILVSLKTC NVVFCCLDSP EGYDEKEVDL
101: EVRGAINVVE ACGRTESIEK IVFSSSLTAS IWRDNIGTQK DVDEKCWSDQ DFCRSKKLWH ALAKMLSEKA AWALAMDRRL NMVSINPGLV VGPSVAQHNA
201: RPTMSYLKGA AQMYENGVLA YVDVKFLADV HIRAFEDVSA CGRYFCFNQI VNTEEEALKL VESLSPLIPM PPRYENEMHG SEVYEERLRN NKLSKLVEAG
301: SAC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)