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AT4G30450.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycine-rich protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycine-rich protein; Has 43753 Blast hits to 9269 proteins in 834 species: Archae - 55; Bacteria - 10441; Metazoa - 12146; Fungi - 3592; Plants - 5151; Viruses - 671; Other Eukaryotes - 11697 (source: NCBI BLink).
Protein Annotations
EMBL:AK229316EMBL:AL161577EMBL:AY084694EMBL:BT025583EMBL:CP002687EnsemblPlants:AT4G30450EnsemblPlants:AT4G30450.1
entrez:829168GeneID:829168Gramene:AT4G30450.1hmmpanther:PTHR38934IntAct:Q9M0B5KEGG:ath:AT4G30450OMA:RMDLGLN
PIR:B85356Proteomes:UP000006548RefSeq:NP_194774.1STRING:3702.AT4G30450.1TAIR:AT4G30450TMHMM:TMhelixUniGene:At.43691
UniProt:Q9M0B5
Coordinates (TAIR10) chr4:-:14886283..14886606
Molecular Weight (calculated) 9531.04 Da
IEP (calculated) 10.75
GRAVY (calculated) 0.28
Length 107 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKAEGLFLL GLVVISSLVM LTESRLARKD LGIDLGGIGI GLGVGLGIGL GGGSGSGAGA GSGSGSGSRS SSSSSSSSSS SSSGSGGSAG SSAGSFAGSR
101: AGSGSGN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)