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AT4G30420.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.852
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nodulin MtN21 /EamA-like transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G28040.5); Has 3568 Blast hits to 3558 proteins in 670 species: Archae - 22; Bacteria - 1633; Metazoa - 4; Fungi - 0; Plants - 1218; Viruses - 0; Other Eukaryotes - 691 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410INP1eggNOG:ENOG410ZZXZEMBL:AL161577EMBL:CP002687EnsemblPlants:AT4G30420EnsemblPlants:AT4G30420.1entrez:829165
GeneID:829165Genevisible:Q9M0B8GO:GO:0005886GO:GO:0006810GO:GO:0016021GO:GO:0022857GO:GO:0055085
Gramene:AT4G30420.1hmmpanther:PTHR31218hmmpanther:PTHR31218:SF60HOGENOM:HOG000237441InParanoid:Q9M0B8InterPro:IPR000620InterPro:IPR030184
KEGG:ath:AT4G30420OMA:YLEGLYLPANTHER:PTHR31218PaxDb:Q9M0B8Pfam:PF00892Pfam:Q9M0B8PhylomeDB:Q9M0B8
PIR:G85355PRIDE:Q9M0B8PRO:PR:Q9M0B8ProteinModelPortal:Q9M0B8Proteomes:UP000006548RefSeq:NP_194771.1STRING:3702.AT4G30420.1
SUPFAM:0043518TAIR:AT4G30420TMHMM:TMhelixUniGene:At.31835UniGene:At.50384UniProt:Q9M0B8
Coordinates (TAIR10) chr4:+:14877069..14878914
Molecular Weight (calculated) 41277.90 Da
IEP (calculated) 8.60
GRAVY (calculated) 0.52
Length 373 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMTMIQLCY AGVTLFARAT LVHGLSPRVF ILYRQAFATI FIFPFLYLSR RKSKIAISSL DLKSFSLIFL VSLIGITINQ NLYLEGLYLT SSSMGSAVGN
101: IIPAITFLIS FLAGYEKLNL RDIRGLAKIA GTILCVAGAI SMTLLRGPKI LNSESALPIA KSVLGHLKDQ NTWLIGCLFL FSSTLCWSFW LILQVPISAY
201: YPDNLSLSAW MCLFGTIQCA VVTFFLEKDP NAWILHSYSE FATCLYAGIG ASALSFTVQA WAIAKRGPVF SALFNPLCTV IVTILAALFF HEEIYTGSLI
301: GGLGVILGLY TVLWGKAKDV MMNQDQRDND QKSEVKIHIE DSSNTTICNK DLKNPLLSKH KSTEEIQTHQ QLY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)