AT4G30420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.957 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nodulin MtN21 /EamA-like transporter family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G28040.5); Has 3568 Blast hits to 3558 proteins in 670 species: Archae - 22; Bacteria - 1633; Metazoa - 4; Fungi - 0; Plants - 1218; Viruses - 0; Other Eukaryotes - 691 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:14877069..14878914 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41277.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.60 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.52 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 373 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAMTMIQLCY AGVTLFARAT LVHGLSPRVF ILYRQAFATI FIFPFLYLSR RKSKIAISSL DLKSFSLIFL VSLIGITINQ NLYLEGLYLT SSSMGSAVGN 101: IIPAITFLIS FLAGYEKLNL RDIRGLAKIA GTILCVAGAI SMTLLRGPKI LNSESALPIA KSVLGHLKDQ NTWLIGCLFL FSSTLCWSFW LILQVPISAY 201: YPDNLSLSAW MCLFGTIQCA VVTFFLEKDP NAWILHSYSE FATCLYAGIG ASALSFTVQA WAIAKRGPVF SALFNPLCTV IVTILAALFF HEEIYTGSLI 301: GGLGVILGLY TVLWGKAKDV MMNQDQRDND QKSEVKIHIE DSSNTTICNK DLKNPLLSKH KSTEEIQTHQ QLY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)