AT4G30310.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.279 peroxisome 0.226 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FGGY family of carbohydrate kinase | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FGGY family of carbohydrate kinase; FUNCTIONS IN: carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485), Carbohydrate kinase, FGGY-related (InterPro:IPR006003); Has 12553 Blast hits to 11885 proteins in 2113 species: Archae - 169; Bacteria - 10333; Metazoa - 409; Fungi - 243; Plants - 67; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:14831913..14834798 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53998.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.76 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 499 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTTAELNPFP SRSVFLGVDV GTGSARAGLF DDNGKLLGSA TSPIQIWKDG DCIEQSSTDI WHAVCAAVKS ACSLANVSDV EVKGIGFAAT CSLVAVDAEG 101: SPVTVSWSGD SRRNIIVWMD HRAVKQAERI NSFNSPVLQY CGGGVSPEME PPKLLWVKEN LKESWSMVYK WMDLSDWLSY RATGDDTRSL CTTVCKWTYL 201: GHAHMHQMTE KASRDMEACG WDDEFWEEIG LGDLVDGHHA KIGRSVAFPG HPLGNGLTAT AAKELGLLAG TPVGTSLIDA HAGGVGVMEK SDVDTLCSRM 301: VLVCGTSTCH MAVSREKLFI PGVWGPFWSA MVPEYWLTEG GQSATGALLD HIIENHVASP RLANRAASQK VSVFELLNNI LKTMAEDTSS PFISALTSDM 401: HILPDFHGNR SPVADPNSKG VIFGMSLDTS EKQLALLYLA TIQGIAYGTR HIVEHCNTHG HKIDTLLACG GLSKNPLFIQ EHADIVVRLF FLEKASLFS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)