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AT4G30310.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.637
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FGGY family of carbohydrate kinase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FGGY family of carbohydrate kinase; FUNCTIONS IN: carbohydrate kinase activity, phosphotransferase activity, alcohol group as acceptor; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485), Carbohydrate kinase, FGGY-related (InterPro:IPR006003); Has 12553 Blast hits to 11885 proteins in 2113 species: Archae - 169; Bacteria - 10333; Metazoa - 409; Fungi - 243; Plants - 67; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1069eggNOG:ENOG410IR1JEMBL:CP002687EnsemblPlants:AT4G30310EnsemblPlants:AT4G30310.1entrez:829154ExpressionAtlas:F4JQ91
GeneID:829154GO:GO:0005975GO:GO:0016301GO:GO:0016773Gramene:AT4G30310.1hmmpanther:PTHR10196hmmpanther:PTHR10196:SF71
InterPro:IPR000577InterPro:IPR006003InterPro:IPR018484InterPro:IPR018485KEGG:00520+2.7.1.-KEGG:00540+2.7.1.-KEGG:00561+2.7.1.30
KEGG:00680+2.7.1.-KEGG:00900+2.7.1.-PaxDb:F4JQ91Pfam:PF00370Pfam:PF02782PhylomeDB:F4JQ91PIRSF:PIRSF000538
PRIDE:F4JQ91ProteinModelPortal:F4JQ91Proteomes:UP000006548RefSeq:NP_849473.1SMR:F4JQ91STRING:3702.AT4G30310.2SUPFAM:SSF53067
TAIR:AT4G30310TIGRfam:TIGR01315TIGRFAMs:TIGR01315UniGene:At.27555unipathway:UPA00618UniProt:F4JQ91
Coordinates (TAIR10) chr4:+:14831913..14834798
Molecular Weight (calculated) 53998.40 Da
IEP (calculated) 5.76
GRAVY (calculated) -0.01
Length 499 amino acids
Sequence (TAIR10)
(BLAST)
001: MTTAELNPFP SRSVFLGVDV GTGSARAGLF DDNGKLLGSA TSPIQIWKDG DCIEQSSTDI WHAVCAAVKS ACSLANVSDV EVKGIGFAAT CSLVAVDAEG
101: SPVTVSWSGD SRRNIIVWMD HRAVKQAERI NSFNSPVLQY CGGGVSPEME PPKLLWVKEN LKESWSMVYK WMDLSDWLSY RATGDDTRSL CTTVCKWTYL
201: GHAHMHQMTE KASRDMEACG WDDEFWEEIG LGDLVDGHHA KIGRSVAFPG HPLGNGLTAT AAKELGLLAG TPVGTSLIDA HAGGVGVMEK SDVDTLCSRM
301: VLVCGTSTCH MAVSREKLFI PGVWGPFWSA MVPEYWLTEG GQSATGALLD HIIENHVASP RLANRAASQK VSVFELLNNI LKTMAEDTSS PFISALTSDM
401: HILPDFHGNR SPVADPNSKG VIFGMSLDTS EKQLALLYLA TIQGIAYGTR HIVEHCNTHG HKIDTLLACG GLSKNPLFIQ EHADIVVRLF FLEKASLFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)